Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01870 and BPUM_1038

See DNA alignment / Visit BSNT_01870 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_01870___yitV.1.24716.seq
#    -bsequence pep-align/BPUM_1038___yitV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01870___yitV-BPUM_1038___yitV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01870___yitV-BPUM_1038___yitV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01870___yitV
# 2: BPUM_1038___yitV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     137/261 (52.5%)
# Similarity:   178/261 (68.2%)
# Gaps:           6/261 ( 2.3%)
# Score: 718.0
# 
#
#=======================================

BSNT_01870___      1 MIQIENQTVSGIPFLHIVKEENRHRAVPLVIFIHGFTSAKEHNLHIAYLL     50
                     ||.|:.|....||||||||.||:.:.:|||.||||||||:|||||.|:.|
BPUM_1038___y      1 MITIDEQITRDIPFLHIVKAENKDKPLPLVFFIHGFTSAREHNLHFAFHL     50

BSNT_01870___     51 AEKGFRAVLPEALHHGERGEEMAVEELAGHFWDIVLNEIEEIGVLKNLFE    100
                     ||||.|.:||:..:||.|.|.:.:||||..||:||||||.||.:||..|:
BPUM_1038___y     51 AEKGMRVILPDCAYHGVRSENLNLEELASRFWEIVLNEIREIDILKIYFQ    100

BSNT_01870___    101 KEGLIDGGRIGLAGTSMGGITTLGALTAYDWIKAGVSLMGSPNYVELFQQ    150
                     ::.||:...||:||||||||||.|||..:|||||.|||||||.|....|.
BPUM_1038___y    101 EKQLIEADLIGVAGTSMGGITTFGALAKHDWIKAAVSLMGSPKYTTFLQA    150

BSNT_01870___    151 QIDHIQSQGIEIDVPEEKVQQLMKRLELRDLSLQPEKLQQRPLLFWHGAK    200
                     ||..::.:|:..|:.:|:|||.:..|...||:||.::|.:|||||||...
BPUM_1038___y    151 QIMDMRHKGLMQDITDEEVQQQLDALRPYDLTLQTDRLNKRPLLFWHAEN    200

BSNT_01870___    201 DKVVPYAPTRKFYDTI-KSHYSEQPERLQFIGDENADHKVPRAAVLKTIE    249
                     |.||||...:..||.: .:.|.|.|:.::||.|..|.|||.|.|:.:||:
BPUM_1038___y    201 DPVVPYRHAKALYDELAATQYKEDPQLIRFITDGQAGHKVSRQAMFETID    250

BSNT_01870___    250 WFETYL-----    255
                     ||.|:|     
BPUM_1038___y    251 WFVTHLKSTNV    261


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