Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01868 and BPUM_1035

See DNA alignment / Visit BSNT_01868 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_01868.1.24716.seq
#    -bsequence pep-align/BPUM_1035.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01868-BPUM_1035.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01868-BPUM_1035.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01868
# 2: BPUM_1035
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      41/66 (62.1%)
# Similarity:    52/66 (78.8%)
# Gaps:           4/66 ( 6.1%)
# Score: 194.5
# 
#
#=======================================

BSNT_01868         1 MRNELFQQAKSFVQQAVMVTNGFEEG-DQEQAILRAKNAVSSAYANSTDA     49
                     ||||||.|||||.::|  :|:.|..| ::::|:.|||||||||:||||||
BPUM_1035          1 MRNELFDQAKSFTEEA--LTSSFSSGLERQEAVKRAKNAVSSAFANSTDA     48

BSNT_01868        50 ERQQLHQFQNQLDKLQ     65
                     ||.|||.||:.||.| 
BPUM_1035         49 ERNQLHTFQDLLDDL-     63


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.