Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01868 and BPUM_1035
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence dna-align/BSNT_01868.1.24716.seq
# -bsequence dna-align/BPUM_1035.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01868-BPUM_1035.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01868-BPUM_1035.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01868
# 2: BPUM_1035
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 135/211 (64.0%)
# Similarity: 135/211 (64.0%)
# Gaps: 32/211 (15.2%)
# Score: 427.5
#
#
#=======================================
BSNT_01868 1 ATGAGAAATGAACTGTTTCAGCAGGCAAAATCATTTGTTCAACAGGC--- 47
.|||||||.|||||.|||.|.||.||.|||||||||....||.|.||
BPUM_1035 1 GTGAGAAACGAACTTTTTGATCAAGCCAAATCATTTACGGAAGAAGCTCT 50
BSNT_01868 48 -----GGTCATGGTGACAAACGGCTTTGAGGAAGGCGATCAGGAG----- 87
..|||| |..||...||.||.|| ||| |||.|||
BPUM_1035 51 TACTTCTTCAT--TTTCATCTGGGTTAGA-----GCG-TCAAGAGGCGGT 92
BSNT_01868 88 CAAGCGATTCTGAGAGCCAAAAATGCTGTATCTTCTGCGTATGCCAATTC 137
|||.| |||||||||||||.|||||||||||.|.|||||||||
BPUM_1035 93 CAAAC--------GAGCCAAAAATGCCGTATCTTCTGCATTTGCCAATTC 134
BSNT_01868 138 GACAGATGCGGAACGTCAACAGCTGCATCAATTTCAAAATCAGCTGGACA 187
|||||||||||||.|..|.|||||||||...||.|||.|...|||.||..
BPUM_1035 135 GACAGATGCGGAAAGAAACCAGCTGCATACCTTCCAAGACTTGCTCGATG 184
BSNT_01868 188 AACTCCAATAA 198
|.|||.||
BPUM_1035 185 ATCTCTAA--- 192
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