Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01865 and BPUM_1032

See DNA alignment / Visit BSNT_01865 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_01865___yitS.1.24716.seq
#    -bsequence pep-align/BPUM_1032___yitS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01865___yitS-BPUM_1032___yitS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01865___yitS-BPUM_1032___yitS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01865___yitS
# 2: BPUM_1032___yitS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     196/284 (69.0%)
# Similarity:   233/284 (82.0%)
# Gaps:           1/284 ( 0.4%)
# Score: 1016.0
# 
#
#=======================================

BSNT_01865___      1 MTVHLIADSATDLPRSYFEEKGIGFIPLRVSLGDKEFEDAVTIHADQIFE     50
                     ||||:|||||.|||.||::|..:..|||||.||::||||.:||...|:|:
BPUM_1032___y      1 MTVHIIADSAADLPLSYYDEHNMTLIPLRVLLGEEEFEDLITIEPKQVFD     50

BSNT_01865___     51 AMQNGETPKTSQASPHTIKNVFLQYAETGDPALYIAFSSGLSGTYQTAVM    100
                     ||:.|.:||||||||:.||..|:..|:....|:|:||||.||||||||||
BPUM_1032___y     51 AMRQGASPKTSQASPNRIKEAFVSLAQNHTSAIYVAFSSELSGTYQTAVM    100

BSNT_01865___    101 IANEVKEEFPDFDLRVIDSKCASLGYGLAVQHVADLCINGNTIQEIETSV    150
                     :|||||||:||||||:||||||||||||||:|...|.|:|||||||||||
BPUM_1032___y    101 MANEVKEEYPDFDLRIIDSKCASLGYGLAVKHAQSLAIDGNTIQEIETSV    150

BSNT_01865___    151 KNFCSQLEHIFTVDDLTYLARGGRISKTSAFVGGLLNIKPLLQMEDGKLV    200
                     |:||..|:||||||||:||||||||||.||||||||:|||:|.:|||||:
BPUM_1032___y    151 KHFCESLQHIFTVDDLSYLARGGRISKASAFVGGLLSIKPILHVEDGKLI    200

BSNT_01865___    201 PLEKIRGQKKLFKRIIELMKERGDDLSNQTVGISYAANKEKATDMKHLIE    250
                     |||||||:|||.|||||||||||.|.||||||||:..:...|.||:.|||
BPUM_1032___y    201 PLEKIRGRKKLLKRIIELMKERGTDWSNQTVGISHGDDPALAEDMRQLIE    250

BSNT_01865___    251 EAFKPKEIIMHPISSAIGSHAGPGTLAIFFLRK-    283
                     ..|.||||.:..:.:|:|||:|||||||||..| 
BPUM_1032___y    251 AEFHPKEIDIQMVGAAVGSHSGPGTLAIFFTGKP    284


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