Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01862 and BPUM_1029

See DNA alignment / Visit BSNT_01862 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_01862___yitL.1.24716.seq
#    -bsequence pep-align/BPUM_1029___yitL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01862___yitL-BPUM_1029___yitL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01862___yitL-BPUM_1029___yitL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01862___yitL
# 2: BPUM_1029___yitL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     222/282 (78.7%)
# Similarity:   255/282 (90.4%)
# Gaps:           0/282 ( 0.0%)
# Score: 1193.0
# 
#
#=======================================

BSNT_01862___      1 MRPGQQLTLSIDHQTDFGYFLTDGEDTILLHNSEMTEDIGDRDEVEVFIY     50
                     ||||:||||.|:::.::|||||||||::|||.|||||||.|:|||||::|
BPUM_1029___y      1 MRPGEQLTLQIENEMEYGYFLTDGEDSVLLHRSEMTEDIDDQDEVEVYLY     50

BSNT_01862___     51 VDQQERLAATMKIPVISADEYGWVEVVDKVEDMGVFVDVGLSKDALVATE    100
                     ||.:||||||||||.|:|..||||||||.|||||.|||||||||||||||
BPUM_1029___y     51 VDHEERLAATMKIPTINAHTYGWVEVVDVVEDMGAFVDVGLSKDALVATE    100

BSNT_01862___    101 HLPPYEDVWPQKGDKLYCMLKVTNRGRMFAKPAPEDIISELFTDASEDLM    150
                     ||||:|:.||:||||||||||||:.||||||||.||:||:|||:|.|.||
BPUM_1029___y    101 HLPPFEEAWPKKGDKLYCMLKVTSYGRMFAKPATEDVISDLFTEAPETLM    150

BSNT_01862___    151 NKELTGTVYRLIASGSFVITDDGIRCFIHPSERKEEPRLGSKVTGRVIQV    200
                     |||:|||:|||||:|||::||.|:|.|||.:||||||||||.||||||.|
BPUM_1029___y    151 NKEITGTIYRLIATGSFMLTDTGVRGFIHRTERKEEPRLGSTVTGRVIAV    200

BSNT_01862___    201 KEDGSVNLSLLPRKQDAMSVDAECILTYMRMRNGAMPYSDKSQPDDIRER    250
                     ||||:||:|||||||:|:|||||.||||||.|||||||.|||.|:|||||
BPUM_1029___y    201 KEDGTVNVSLLPRKQEALSVDAEEILTYMRTRNGAMPYGDKSDPEDIRER    250

BSNT_01862___    251 FNMSKAAFKRALGHLMKNGKVYQENGWTYEKK    282
                     |.|||||||||||||||||.|||:.|||||||
BPUM_1029___y    251 FQMSKAAFKRALGHLMKNGLVYQKEGWTYEKK    282


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.