Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01862 and BPUM_1029
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence dna-align/BSNT_01862___yitL.1.24716.seq
# -bsequence dna-align/BPUM_1029___yitL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01862___yitL-BPUM_1029___yitL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01862___yitL-BPUM_1029___yitL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01862___yitL
# 2: BPUM_1029___yitL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 853
# Identity: 624/853 (73.2%)
# Similarity: 624/853 (73.2%)
# Gaps: 8/853 ( 0.9%)
# Score: 2166.0
#
#
#=======================================
BSNT_01862___ 1 ATGAGACCAGGGCAGCAATTAACCTTGAGTATAGATCACCAAACCGACTT 50
|||||||||||..|||||.|.||||||...|||||..||.|.|..||.|.
BPUM_1029___y 1 ATGAGACCAGGTGAGCAACTGACCTTGCAAATAGAGAACGAGATGGAATA 50
BSNT_01862___ 51 CGGTTACTTTTTAACCGATGGGGAAGATACGATTCTCTTACATAACAGTG 100
|||.||||||||.||.|||||.||||||.||.|.|||||.||....||||
BPUM_1029___y 51 CGGCTACTTTTTGACAGATGGTGAAGATTCGGTCCTCTTGCACCGTAGTG 100
BSNT_01862___ 101 AAATGACTGAGGATATCGGGGACAGAGACGAAGTAGAAGTCTTTATATAC 150
|||||||.||.|||||.|..|||..|||.||||||||.||||...|||||
BPUM_1029___y 101 AAATGACAGAAGATATTGATGACCAAGATGAAGTAGAGGTCTACTTATAC 150
BSNT_01862___ 151 GTCGACCAGCAGGAAAGGCTTGCGGCCACGATGAAAATTCCGGTCATCAG 200
||.||.||..|.||||||||.||.||.|||||||||||.|||...||||.
BPUM_1029___y 151 GTAGATCATGAAGAAAGGCTAGCTGCAACGATGAAAATACCGACAATCAA 200
BSNT_01862___ 201 CGCGGATGAATATGGCTGGGTTGAAGTGGTGGATAAAGTGGAAGATATGG 250
.|||.||..||||||||||||.|||||.||.||....||.|||||.||||
BPUM_1029___y 201 TGCGCATACATATGGCTGGGTAGAAGTCGTAGACGTCGTAGAAGACATGG 250
BSNT_01862___ 251 GCGTTTTCGTTGATGTCGGTTTATCGAAGGACGCACTAGTCGCAACTGAG 300
|.|..||.||.|||||.||.||.||.|||||.|||||.||||||||.||.
BPUM_1029___y 251 GTGCATTTGTGGATGTTGGCTTGTCAAAGGATGCACTTGTCGCAACAGAA 300
BSNT_01862___ 301 CATTTGCCGCCGTATGAAGATGTCTGGCCGCAAAAAGGGGACAAACTTTA 350
|||.|.||.||.|.|||.||.|..||||||.|||||||.|||||||||||
BPUM_1029___y 301 CATCTCCCTCCTTTTGAGGAAGCATGGCCGAAAAAAGGAGACAAACTTTA 350
BSNT_01862___ 351 CTGTATGCTGAAGGTGACGAACCGGGGGCGCATGTTTGCGAAACCAGCGC 400
||||||||||||.||.||.|.|...||..|.|||||.|||||.|||||..
BPUM_1029___y 351 CTGTATGCTGAAAGTCACAAGCTACGGTAGAATGTTCGCGAAGCCAGCCA 400
BSNT_01862___ 401 CGGAAGATATCATCAGCGAACTGTTTACCGACGCTTCAGAAGATC-TGAT 449
|.||||||.|.|||||.||..|.|||||.||.||..|.||| |.| |.||
BPUM_1029___y 401 CAGAAGATGTGATCAGTGACTTATTTACTGAGGCACCCGAA-ACCTTAAT 449
BSNT_01862___ 450 GAATAAAGAGCTGACAGGTACGGTGTACAGGCTGATCGCATCGGGTTCAT 499
|||.|||||..|.||.||.||..|.||..|..|.||.||..|.||.||.|
BPUM_1029___y 450 GAACAAAGAAATCACTGGAACAATTTATCGCTTAATTGCGACAGGCTCGT 499
BSNT_01862___ 500 TCGTGATCACGGATGAC-GGTATCCGCTGTTTTATTCACCCGTCAGAAAG 548
|..||.|.||.||| || ||..|.||..|.|||||.||||.|.|||||.|
BPUM_1029___y 500 TTATGCTGACAGAT-ACAGGGGTGCGAGGGTTTATCCACCGGACAGAACG 548
BSNT_01862___ 549 AAAAGAGGAGCCAAGACTGGGTTCAAAAGTCACAGGCCGGGTGATTCAAG 598
|||.||.|||||||||.|.||.||.|..||.|||||.||.||.|||..||
BPUM_1029___y 549 AAAGGAAGAGCCAAGATTAGGATCGACCGTGACAGGACGCGTCATTGCAG 598
BSNT_01862___ 599 TGAAAGAAGACGGTTCAGTCAACTTGTCGCTGCTTCCGAGAAAACAGGAT 648
|||||||.||.||..|.||.|||.||||.||||||||.|||||||||||.
BPUM_1029___y 599 TGAAAGAGGATGGAACTGTGAACGTGTCTCTGCTTCCTAGAAAACAGGAA 648
BSNT_01862___ 649 GCAATGTCTGTTGATGCTGAGTGCATTC-TAACGTATATGAGAATGAGAA 697
||..|.|||||.|||||.|| .|.|.|| ||||.||||||||||.|||||
BPUM_1029___y 649 GCGTTATCTGTCGATGCAGA-AGAAATCTTAACTTATATGAGAACGAGAA 697
BSNT_01862___ 698 ACGGTGCCATGCCGTACAGTGACAAAAGCCAGCCTGACGATATCAGAGAA 747
|.|||||.|||||.||..|.||.||||||.|.||.||.||.|||.|.|||
BPUM_1029___y 698 ATGGTGCGATGCCTTATGGAGATAAAAGCGATCCAGAAGACATCCGCGAA 747
BSNT_01862___ 748 CGTTTTAATATGAGCAAAGCCGCCTTTAAACGCGCGCTGGGCCATTTGAT 797
||.||..|.||||||||.||.|||||||||||.||..|.||.||||||||
BPUM_1029___y 748 CGATTCCAAATGAGCAAGGCAGCCTTTAAACGGGCATTAGGTCATTTGAT 797
BSNT_01862___ 798 GAAAAACGGAAAAGTGTATCAGGAAAATGGATGGACATACGAGAAAAAAT 847
|||||||||...|||.||.||..||.|.||.|||||||||||||||||||
BPUM_1029___y 798 GAAAAACGGCCTAGTCTACCAAAAAGAGGGCTGGACATACGAGAAAAAAT 847
BSNT_01862___ 848 AG- 849
|
BPUM_1029___y 848 -GA 849
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