Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01858 and BPUM_1025

See DNA alignment / Visit BSNT_01858 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_01858.1.24716.seq
#    -bsequence pep-align/BPUM_1025___yitH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01858-BPUM_1025___yitH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01858-BPUM_1025___yitH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01858
# 2: BPUM_1025___yitH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:      56/290 (19.3%)
# Similarity:    85/290 (29.3%)
# Gaps:         147/290 (50.7%)
# Score: 279.5
# 
#
#=======================================

BSNT_01858         1 -MDVVDELIELHEEHVSGLLRLCRQAGWPDYGEQELALLVQQGRFFGYQN     49
                      .:||...:.|  :.:..|:.|.::..||||..:||..|:..|.|.|:..
BPUM_1025___y      1 MTNVVQRALTL--DDIPDLITLSQEVDWPDYNAEELTSLLTNGYFTGFST     48

BSNT_01858        50 VSGDIISCIGLFLFGRLASIGLVIVDKEYQRLGLGRRMVNACITQTDENT     99
                     |.|.:|||.|||.:.|:||||.|||.:.::.|||.|:|::..:.|.|::.
BPUM_1025___y     49 VDGQVISCAGLFQYDRMASIGAVIVSRTHRGLGLARKMIDTLLDQCDQSI     98

BSNT_01858       100 AIRLCATKEGLPLYEKAGFHTAGSVRKYSCHSFQPYTKKLDSQMSGFFL-    148
                     .:.|.||.:|.|:|||.||||||.:..|......|.|.::...:   .| 
BPUM_1025___y     99 PVVLTATVQGRPVYEKIGFHTAGYITTYKAQKTTPETLRVSDDI---HLS    145

BSNT_01858       148 --------------------------------------------------    148
                                                                       
BPUM_1025___y    146 SADESHLPCIEALDEKGAGTNRSSFLKNRMNRAAQRIIAKNEHHEITGFA    195

BSNT_01858       148 --------------------------------------------------    148
                                                                       
BPUM_1025___y    196 FGVETPANLMIGPLAANDEITALSLIRSLISSYSGPIRLDMQEETAERLH    245

BSNT_01858       148 ----------------------------------------    148
                                                             
BPUM_1025___y    246 ESLVEAGFTKTNKAHYMMIRGKEKLNDPALLYFLASQAFS    285


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