Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01844 and BPUM_1014

See DNA alignment / Visit BSNT_01844 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_01844___yisR.1.24716.seq
#    -bsequence pep-align/BPUM_1014___yisR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01844___yisR-BPUM_1014___yisR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01844___yisR-BPUM_1014___yisR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01844___yisR
# 2: BPUM_1014___yisR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     146/288 (50.7%)
# Similarity:   206/288 (71.5%)
# Gaps:           1/288 ( 0.3%)
# Score: 787.0
# 
#
#=======================================

BSNT_01844___      1 MPR-ILFTVPPFPVFIAAGEGVFKKGETHVKRVFSVFDLIYVKQGTLYIT     49
                     |.| |.||||||||:||:|:|||.:||.|:.|.|:||||:||.:|.|:||
BPUM_1014___y      1 MNRFITFTVPPFPVYIASGKGVFDQGERHISRTFTVFDLLYVTRGQLWIT     50

BSNT_01844___     50 ENETSFSVEGGEYILLSPGLEHYGTKGSDEATSYYWLHFDEHRYEFTAKG     99
                     |:..:..|:.||||:|||||.|.|....:|.|.|.||||....:|.|.:.
BPUM_1014___y     51 EDRKAHHVKEGEYIILSPGLSHGGHLPCEEETHYEWLHFSIDPFELTNRP    100

BSNT_01844___    100 GSNWSELQQEKGSFEEPARYGLALPRKGKVQRPQFMAQQFEKLIDYSAEN    149
                     ..:|.:::|.:.:||:||.|..:|||||||:....:.:...::...:.:.
BPUM_1014___y    101 REHWFDMKQNQATFEKPATYEFSLPRKGKVKGRNVLEKHLAQMRALNDDA    150

BSNT_01844___    150 SDLPLRKQILFAELMLHLQKEAFQIPSAKERVAWEAARYLQEHYKEKTTI    199
                     |:|||:||:.|.||::|||||||.||||||.||.|...||:.|:.:|..:
BPUM_1014___y    151 SELPLKKQLQFEELLIHLQKEAFHIPSAKENVASEVVHYLERHFMKKLQM    200

BSNT_01844___    200 KDLSLALHYHQDYVSRCMQQVLGVTPAQYTNRVRMTEAKRLLSSTNDKMG    249
                     .:|:..||||.||::||||.|.|:||.||.||:::.:||.:|:||||::.
BPUM_1014___y    201 DELAEKLHYHPDYITRCMQTVYGLTPNQYINRLKVEKAKSMLASTNDQIA    250

BSNT_01844___    250 VIAETVGMEDPTYFSKLFKQIEGISPIEYRKIVSRKVQ    287
                     .|||.||::|||||||||:|.||::|||||.:..|..:
BPUM_1014___y    251 AIAEQVGIDDPTYFSKLFRQNEGMTPIEYRHLAKRTTK    288


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