Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01842 and BPUM_1012

See DNA alignment / Visit BSNT_01842 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence pep-align/BSNT_01842___yisP.1.24716.seq
#    -bsequence pep-align/BPUM_1012___yisP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01842___yisP-BPUM_1012___yisP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01842___yisP-BPUM_1012___yisP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01842___yisP
# 2: BPUM_1012___yisP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     121/279 (43.4%)
# Similarity:   166/279 (59.5%)
# Gaps:          11/279 ( 3.9%)
# Score: 564.0
# 
#
#=======================================

BSNT_01842___      1 MKEIKEAYQQCGQIVSAREPACYKAFSFLPLKQRQAAWAVMAFCHTAAN-     49
                     |.:::.|.:.|.:.:.......|:|||.||.|:|||.|||.:||..|.: 
BPUM_1012___y      1 MVDVQTALKLCEETIQTHSKTFYRAFSMLPKKKRQAVWAVYSFCRKADDI     50

BSNT_01842___     50 ADE-----KALSAIEAEAEDVFSGTYNGNHFLWKAFGHAYQTFTLDSKPF     94
                     .||     :.|::.....:....|..:.|..:|.|..|.:|.|.:|..||
BPUM_1012___y     51 VDESPSPKEELASFRETFDRFLQGEVDRNDPMWVALEHTFQEFRMDEAPF    100

BSNT_01842___     95 REFIAAQK--AEDKPFGNLDELLMHAYQTGGAAGLMLLPIMARRHQEQLT    142
                     |:.:..|:  .|...:..|||||:::|......|||||||:|.|.:|||.
BPUM_1012___y    101 RDLLQGQEMDLEQHRYETLDELLIYSYHVASTVGLMLLPIIAPRKKEQLK    150

BSNT_01842___    143 HAAGSLGLAIQLIRILRDIGTGQQQKSRI--PREVMQQFGYTEADLQKGT    190
                     .||.|||:|:||..||||||..:.::.||  |::||.||||||.:||:|.
BPUM_1012___y    151 EAAISLGIAMQLTNILRDIGEDKAERDRIYLPKQVMDQFGYTEQELQEGI    200

BSNT_01842___    191 VNKAFTMTWEYIAFEAEAYLEECQDALPLFPQYSQKTVKAALHLYRAVLE    240
                     ||:||...|||||||||||.||..|.|..||.||:..||||.|.|:|:|:
BPUM_1012___y    201 VNQAFQHVWEYIAFEAEAYYEEFFDHLHEFPLYSRIPVKAAAHFYKAILD    250

BSNT_01842___    241 KIRAKQHDVFQLHFALTETEVKQILSDI-    268
                     |.|..::.||.....::..|...||.|| 
BPUM_1012___y    251 KTRENEYRVFTERSFISNQEKALILEDIT    279


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