Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01834 and BPUM_1007

See DNA alignment / Visit BSNT_01834 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01834___yisK.1.24716.seq
#    -bsequence pep-align/BPUM_1007___yisK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01834___yisK-BPUM_1007___yisK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01834___yisK-BPUM_1007___yisK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01834___yisK
# 2: BPUM_1007___yisK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     205/301 (68.1%)
# Similarity:   255/301 (84.7%)
# Gaps:           0/301 ( 0.0%)
# Score: 1120.0
# 
#
#=======================================

BSNT_01834___      1 MKFATGELYNRMFVGLIIDDEKIMDLQKAEKKLFELETIPGSLIECIAEG     50
                     |||.|||:::|||:|::||||.:||::|||.|||||||:|.||.|||..|
BPUM_1007___y      1 MKFFTGEIHSRMFIGVVIDDEWVMDVKKAEAKLFELETLPNSLAECIHMG     50

BSNT_01834___     51 DKFVAHARQLAEWAKKPNDELGSFMYSLSEVKLHAPIPKPSKNIICIGKN    100
                     ||||.|.:||.:||:|..::.||::|.||:||||||||||:|||:|:|||
BPUM_1007___y     51 DKFVEHVKQLLDWAEKKQEDRGSYVYPLSDVKLHAPIPKPAKNIMCVGKN    100

BSNT_01834___    101 YRDHAIEMGSEADIPEHPMVFTKSPVTVTGHGDIVKSHEEVTSQLDYEGE    150
                     |:||.:||||.||||:..|:|||:|.:|.||...:..||:|||:||||||
BPUM_1007___y    101 YQDHVMEMGSAADIPKDVMIFTKAPTSVIGHEADILLHEDVTSELDYEGE    150

BSNT_01834___    151 LAVVIGKSGTRISKEDAYDHVFGYTIVNDITARDLQKRHKQFFIGKSLDT    200
                     ||:||||:|..|:.||..|::|||||:||:|||||||:||||||||||||
BPUM_1007___y    151 LAIVIGKTGKNIAPEDVRDYLFGYTILNDVTARDLQKKHKQFFIGKSLDT    200

BSNT_01834___    201 TCPMGPVLVHKSSIQEPERLKVETRVNGELRQSGSASDMIFSIPELIETL    250
                     |||:||.:||||.|::...|.|||:||||:|||.|...|||||..::.||
BPUM_1007___y    201 TCPIGPYIVHKSVIEDHGALHVETKVNGEVRQSASTELMIFSIENIVSTL    250

BSNT_01834___    251 SKGMTLEAGDIIATGTPSGVGKGFTPPKFLRSGDKIDITIDPIGTLSNQI    300
                     ||||||||||||||||||||||||.|||||.|||:|||||:|||||||::
BPUM_1007___y    251 SKGMTLEAGDIIATGTPSGVGKGFEPPKFLASGDQIDITIEPIGTLSNRV    300

BSNT_01834___    301 G    301
                     .
BPUM_1007___y    301 K    301


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