Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01832 and BPUM_1005

See DNA alignment / Visit BSNT_01832 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01832___yisJ.1.24716.seq
#    -bsequence pep-align/BPUM_1005___cotH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01832___yisJ-BPUM_1005___cotH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01832___yisJ-BPUM_1005___cotH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01832___yisJ
# 2: BPUM_1005___cotH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 367
# Identity:     119/367 (32.4%)
# Similarity:   183/367 (49.9%)
# Gaps:          63/367 (17.2%)
# Score: 435.5
# 
#
#=======================================

BSNT_01832___      1 -----MERVHLFFH-------REQLKRKGTAKGLFVTDRSVSPILLTQRD     38
                          ::::.::.|       |:.:......:|:..|.:..|.|..:.|.
BPUM_1005___c      1 MTTEPLKQMDIWIHPKDLIELRKDIWNDEPVEGILKTGQIKSHIYASYRG     50

BSNT_01832___     39 ----RAEKASYEISWE--KSLLGERTLFLNAEQDDPSLMRRRLAYCFFDQ     82
                         :.:|.||:|.:.  |...||....||||.:|||.:|.||::.||:|
BPUM_1005___c     51 SHIRKLKKKSYQIEYRKPKQRQGESIFHLNAEYNDPSFIRNRLSFYFFEQ    100

BSNT_01832___     83 IGVPAPAASYSFLTINGQPEGIYLNIKN--------HQPAGKRSYGVKTA    124
                     |||.:||||:.||||||:.|||||.|::        .|.:|...|.....
BPUM_1005___c    101 IGVLSPAASHVFLTINGRKEGIYLKIESVDEHFFQKRQLSGGGIYYAVDD    150

BSNT_01832___    125 DPRVP-LSLFN-----------------NDFSAFLHEFFILIRTAGDDEL    156
                     |.... ||.|:                 :.....|.||...:.||.||..
BPUM_1005___c    151 DANFSLLSSFDKKPKKHLLLGYEKKTGTSQHDQQLSEFIYFLNTAKDDIF    200

BSNT_01832___    157 AERIKLYLDVKLFFLWLIGNACTN--QGFYYTFCL--NESGRLYVSPMET    202
                     ||:|:.||||..:|.||||..||.  .||.:.:.|  ||.||..|.|.:.
BPUM_1005___c    201 AEKIEHYLDVTQYFRWLIGVVCTQNFDGFVHNYALYVNEQGRFQVLPWDY    250

BSNT_01832___    203 RSLAVQEWYEE----DPLLTKG-KTLSSRLLSIPAFRSQYHTLMKNVLKR    247
                     .:...::.:.|    |.:...| .||::|||.||:|:..|:||.::||..
BPUM_1005___c    251 DATWGRDIHGEEMAFDYIPVSGFNTLTARLLDIPSFKKAYYTLFQHVLDT    300

BSNT_01832___    248 SFTIERLSPLINEWHLDICQSAADDPFI--KKSPFQIEKEQTNILRE-IE    294
                     .|..::|.|:|.:||..|.:...:||:.  :|...|.|:|   |:|: |.
BPUM_1005___c    301 HFLADQLCPVIEKWHASIEKRIGNDPYTRDRKDILQSERE---IIRQYIN    347

BSNT_01832___    295 ERQDFLQAHLARL----    307
                     :|:.:|||.:.:.    
BPUM_1005___c    348 KRRRYLQAEIRKEREGT    364


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