Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01829 and BPUM_1004

See DNA alignment / Visit BSNT_01829 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01829___yisI.1.24716.seq
#    -bsequence pep-align/BPUM_1004___yisI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01829___yisI-BPUM_1004___yisI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01829___yisI-BPUM_1004___yisI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01829___yisI
# 2: BPUM_1004___yisI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity:      29/60 (48.3%)
# Similarity:    38/60 (63.3%)
# Gaps:          11/60 (18.3%)
# Score: 133.0
# 
#
#=======================================

BSNT_01829___      1 -MNSKIEEMRITLIETAQKYGMNSKETIQCSQELDILLNTRIKEEMIFGR     49
                      :|.:||:.|:.|||||:|:|||::|||:||||||.|||..||       
BPUM_1004___y      1 MINYEIEQKRLHLIETAKKFGMNAEETIRCSQELDTLLNKGIK-------     43

BSNT_01829___     50 YLENSRM---     56
                     |..|...   
BPUM_1004___y     44 YTSNECSKKG     53


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