Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01829 and BPUM_1004
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:20
# Commandline: needle
# -asequence dna-align/BSNT_01829___yisI.1.24716.seq
# -bsequence dna-align/BPUM_1004___yisI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01829___yisI-BPUM_1004___yisI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01829___yisI-BPUM_1004___yisI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01829___yisI
# 2: BPUM_1004___yisI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity: 112/184 (60.9%)
# Similarity: 112/184 (60.9%)
# Gaps: 35/184 (19.0%)
# Score: 318.5
#
#
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BSNT_01829___ 1 ATGAACA---GTAAAATTGAAGAAATGAGGATCACA-CTAATTGAAACCG 46
||||.|| .|.||||||||.||| .|.|||.||| .|||||||.||||
BPUM_1004___y 1 ATGATCAATTATGAAATTGAACAAA-AAAGATTACATTTAATTGAGACCG 49
BSNT_01829___ 47 CACAAAAATACGGCATGAATTCAAAAGAAACGATTCA-ATGCAGCCAAGA 95
||.||||||.|||.||||||.|..|||||||.| ||| .|||||.|||||
BPUM_1004___y 50 CAAAAAAATTCGGGATGAATGCCGAAGAAACCA-TCAGGTGCAGTCAAGA 98
BSNT_01829___ 96 GCTGGATATCCTGCTGAATACCCGGATTAAA--------GAAGAAATGAT 137
|||.||.|..||..|.||||...|.||.||| |||..||||
BPUM_1004___y 99 GCTTGACACACTCTTAAATAAAGGCATCAAATACACCTCGAATGAATG-- 146
BSNT_01829___ 138 TTTTGGGAGATATCTTGAAAACTCCCGTATGTAA 171
.|||..|||| ..||||
BPUM_1004___y 147 -----------CTCTAAAAAA-------GGGTAA 162
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