Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01829 and BPUM_1004

See Amino acid alignment / Visit BSNT_01829 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_01829___yisI.1.24716.seq
#    -bsequence dna-align/BPUM_1004___yisI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01829___yisI-BPUM_1004___yisI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01829___yisI-BPUM_1004___yisI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01829___yisI
# 2: BPUM_1004___yisI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity:     112/184 (60.9%)
# Similarity:   112/184 (60.9%)
# Gaps:          35/184 (19.0%)
# Score: 318.5
# 
#
#=======================================

BSNT_01829___      1 ATGAACA---GTAAAATTGAAGAAATGAGGATCACA-CTAATTGAAACCG     46
                     ||||.||   .|.||||||||.||| .|.|||.||| .|||||||.||||
BPUM_1004___y      1 ATGATCAATTATGAAATTGAACAAA-AAAGATTACATTTAATTGAGACCG     49

BSNT_01829___     47 CACAAAAATACGGCATGAATTCAAAAGAAACGATTCA-ATGCAGCCAAGA     95
                     ||.||||||.|||.||||||.|..|||||||.| ||| .|||||.|||||
BPUM_1004___y     50 CAAAAAAATTCGGGATGAATGCCGAAGAAACCA-TCAGGTGCAGTCAAGA     98

BSNT_01829___     96 GCTGGATATCCTGCTGAATACCCGGATTAAA--------GAAGAAATGAT    137
                     |||.||.|..||..|.||||...|.||.|||        |||..||||  
BPUM_1004___y     99 GCTTGACACACTCTTAAATAAAGGCATCAAATACACCTCGAATGAATG--    146

BSNT_01829___    138 TTTTGGGAGATATCTTGAAAACTCCCGTATGTAA    171
                                .|||..||||       ..||||
BPUM_1004___y    147 -----------CTCTAAAAAA-------GGGTAA    162


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