Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01825 and BPUM_1002

See DNA alignment / Visit BSNT_01825 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01825___gerPB.1.24716.seq
#    -bsequence pep-align/BPUM_1002___gerPB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01825___gerPB-BPUM_1002___gerPB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01825___gerPB-BPUM_1002___gerPB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01825___gerPB
# 2: BPUM_1002___gerPB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 77
# Identity:      52/77 (67.5%)
# Similarity:    59/77 (76.6%)
# Gaps:           0/77 ( 0.0%)
# Score: 252.0
# 
#
#=======================================

BSNT_01825___      1 MNFYINQTIQINYLRLESISNSSILQIGSAGSIKSLSNLYNTGSYVEPAP     50
                     |||||||.|||||||:||:||||:||||||||||:||||||||||||.||
BPUM_1002___g      1 MNFYINQAIQINYLRVESVSNSSVLQIGSAGSIKALSNLYNTGSYVEAAP     50

BSNT_01825___     51 EVSGSGQPLQLQEPDTGSLVPLQPPGR     77
                     ..:|:....:.|...|...||||.|..
BPUM_1002___g     51 AAAGTQGIQESQGASTTPFVPLQSPTT     77


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.