Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01821 and BPUM_1000

See DNA alignment / Visit BSNT_01821 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01821___gerPD.1.24716.seq
#    -bsequence pep-align/BPUM_1000___gerPD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01821___gerPD-BPUM_1000___gerPD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01821___gerPD-BPUM_1000___gerPD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01821___gerPD
# 2: BPUM_1000___gerPD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 58
# Identity:      41/58 (70.7%)
# Similarity:    50/58 (86.2%)
# Gaps:           0/58 ( 0.0%)
# Score: 214.0
# 
#
#=======================================

BSNT_01821___      1 MIFTVINRSLEVGDIRMNGVSSSSVFHIGDTESIYLSSIFDTPPESLIIG     50
                     |.|||:||::|.|.|::.||||||:|.||||:.:.|||||||||||||||
BPUM_1000___g      1 MNFTVVNRNIETGSIKVVGVSSSSLFIIGDTDHVQLSSIFDTPPESLIIG     50

BSNT_01821___     51 PFVPIAPE     58
                     ||||:||.
BPUM_1000___g     51 PFVPLAPR     58


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