Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01820 and BPUM_0999

See DNA alignment / Visit BSNT_01820 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01820.1.24716.seq
#    -bsequence pep-align/BPUM_0999___gerPE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01820-BPUM_0999___gerPE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01820-BPUM_0999___gerPE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01820
# 2: BPUM_0999___gerPE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      52/143 (36.4%)
# Similarity:    75/143 (52.4%)
# Gaps:          30/143 (21.0%)
# Score: 229.5
# 
#
#=======================================

BSNT_01820         1 --------------------MFQVGDTNEIDMSVKVFAVQRSLSTFYNNE     30
                                         :.|:|||.|:...|||.||||::|.||.||
BPUM_0999___g      1 MIKRTSQVKFSKVNSVGISSVVQIGDTQELCPKVKVLAVQRTVSLFYGNE     50

BSNT_01820        31 G-SFNKKEYQIFQQQAVKPIPETGVQSAFCHEVPAIYVRSIKIQGVSASS     79
                     . :.:.||::::.:.....:||..|::||.||.|.|.|.||.::|||:||
BPUM_0999___g     51 AENLDAKEFEVYYEPIPLMLPERSVRTAFYHEKPVIKVSSIHVEGVSSSS    100

BSNT_01820        80 VLHAGSASLIRGDARIKHIRQIQS-----PRSQS--PAKNI--    113
                     |...||...:.|.||:||||::.|     |.||.  ||..:  
BPUM_0999___g    101 VFQIGSTCGMNGVARVKHIRELFSNDESPPNSQMDLPAHMMVI    143


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