Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01819 and BPUM_0998

See DNA alignment / Visit BSNT_01819 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_01819___gerPF.1.24716.seq
#    -bsequence pep-align/BPUM_0998___gerPF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01819___gerPF-BPUM_0998___gerPF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01819___gerPF-BPUM_0998___gerPF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01819___gerPF
# 2: BPUM_0998___gerPF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 75
# Identity:      62/75 (82.7%)
# Similarity:    68/75 (90.7%)
# Gaps:           3/75 ( 4.0%)
# Score: 329.0
# 
#
#=======================================

BSNT_01819___      1 ---MPAIVGPIAINSISGGVVNFGDSFYLSPKSSSKSALGSGAGNTGDFL     47
                        ||||||||.||||||||||.|||||||||||||||||||||||||||
BPUM_0998___g      1 MSIMPAIVGPIYINSISGGVVNVGDSFYLSPKSSSKSALGSGAGNTGDFL     50

BSNT_01819___     48 LLNNAVNATNYIDPDVNDQDMVGNG     72
                     :|||.::||||:|||:|||:||||.
BPUM_0998___g     51 ILNNGISATNYVDPDLNDQNMVGNA     75


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