Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01819 and BPUM_0998
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:20
# Commandline: needle
# -asequence dna-align/BSNT_01819___gerPF.1.24716.seq
# -bsequence dna-align/BPUM_0998___gerPF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01819___gerPF-BPUM_0998___gerPF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01819___gerPF-BPUM_0998___gerPF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01819___gerPF
# 2: BPUM_0998___gerPF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 163/229 (71.2%)
# Similarity: 163/229 (71.2%)
# Gaps: 11/229 ( 4.8%)
# Score: 575.0
#
#
#=======================================
BSNT_01819___ 1 ---------ATGCCAGCAATTGTCGGGCCTATAGCTATCAATTCCATATC 41
|||||||||||||||||.||.||....||.||.||.||.||
BPUM_0998___g 1 ATGTCGATTATGCCAGCAATTGTCGGACCCATTTACATTAACTCTATTTC 50
BSNT_01819___ 42 GGGCGGAGTCGTAAACTTTGGTGATTCCTTTTACCTTTCTCCGAAAAGCT 91
.||.||.|||||.|||.|.|||||.||.||.|||.|.||.||.|||||||
BPUM_0998___g 51 TGGAGGCGTCGTCAACGTCGGTGACTCATTCTACTTGTCGCCTAAAAGCT 100
BSNT_01819___ 92 CTTCAAAATCTGCGCTCGGTTCGGGAGCAGGAAACACGGGAGATTTCCTT 141
|.|||||.|||||..|.||.||.|||||.|||||.||.|||||||||.|.
BPUM_0998___g 101 CGTCAAAGTCTGCTTTAGGCTCTGGAGCGGGAAATACCGGAGATTTCTTG 150
BSNT_01819___ 142 CTATTAAATAAT-GCAGTCAACGCGACAAATTATATAGACCCCGATGTCA 190
.|.||||||||| ||| |.|.|||.||.||.|||.|.||.||.||..|.|
BPUM_0998___g 151 ATCTTAAATAATGGCA-TTAGCGCCACCAACTATGTGGATCCTGACTTAA 199
BSNT_01819___ 191 ACGATCAGGATATGGTTGGAAACGGATAA 219
|.||||||.|||||||.||.||.|.||||
BPUM_0998___g 200 ATGATCAGAATATGGTAGGCAATGCATAA 228
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