Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01777 and BPUM_0990
See
DNA alignment /
Visit
BSNT_01777 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence pep-align/BSNT_01777___yhjE.1.24716.seq
# -bsequence pep-align/BPUM_0990___yhjE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01777___yhjE-BPUM_0990___yhjE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01777___yhjE-BPUM_0990___yhjE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01777___yhjE
# 2: BPUM_0990___yhjE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 135/207 (65.2%)
# Similarity: 169/207 (81.6%)
# Gaps: 2/207 ( 1.0%)
# Score: 744.0
#
#
#=======================================
BSNT_01777___ 1 MLEHFLSYLTQEHLTELFQSYRAFGPLIAVLLPLIEAFLPFLPLIVFVVA 50
:..|||..|.|::|..|:||:||||::|:||||||||||||||:.|.||
BPUM_0990___y 1 -MTSFLSLFTHENITSFFESYKAFGPIVAILLPLIEAFLPFLPLVAFAVA 49
BSNT_01777___ 51 NTNSFGLWEGFILSWAGSTAGSILVFLIVRQYGQRKLLGFIRSHPSVRKL 100
|.|:|||||||:|:|.|::||||||||::|::||.::|.||..|||::||
BPUM_0990___y 50 NANAFGLWEGFLLTWIGASAGSILVFLLIRKFGQMRMLNFISRHPSIKKL 99
BSNT_01777___ 101 MLWVERHGFGPMFLLLCFPFTPSAAVNVVAGLSRIGTRPFILAAASGKLV 150
|||||:.||||:|:|||||||||||||||||||||....|.||..|||.|
BPUM_0990___y 100 MLWVEKRGFGPLFILLCFPFTPSAAVNVVAGLSRISFWQFSLATLSGKCV 149
BSNT_01777___ 151 MIFMISFIGYDLHALITQPIRTVIAVLVITVLWYVGKKVERYLYVRASQR 200
|:|:||||||||.||:..|:|:|.|||||.:||||||:||..|.:|.|:|
BPUM_0990___y 150 MLFIISFIGYDLSALVKNPLRSVFAVLVIAILWYVGKRVENRLNIRMSKR 199
BSNT_01777___ 201 EHDGGRQ 207
|..||.
BPUM_0990___y 200 EDKGGS- 205
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.