Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03882 and BPUM_0983

See DNA alignment / Visit BSNT_03882 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_03882___yrdF.1.24716.seq
#    -bsequence pep-align/BPUM_0983___yrdF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03882___yrdF-BPUM_0983___yrdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03882___yrdF-BPUM_0983___yrdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03882___yrdF
# 2: BPUM_0983___yrdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 91
# Identity:      48/91 (52.7%)
# Similarity:    63/91 (69.2%)
# Gaps:           0/91 ( 0.0%)
# Score: 251.0
# 
#
#=======================================

BSNT_03882___      1 MRKIMIDGRDFENIEVLHDVLKDKLDFPDYYGGNLDALWDCLTGWVDLPL     50
                     |:|:.:||......|.|||.||..|..|||||.|||||||||||.|:||:
BPUM_0983___y      1 MKKVQLDGALCRTQEELHDQLKTVLHLPDYYGKNLDALWDCLTGEVNLPV     50

BSNT_03882___     51 TLVLINFEFSKKFLGSYANDVLEVLQEAQEELKDEFKIIIE     91
                     .|..:||:.||..||.||..|.::.:||:||||.:|::.|:
BPUM_0983___y     51 ELTWVNFDTSKDALGEYAESVKQLFKEAEEELKGQFQVSIQ     91


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