Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01768 and BPUM_0978

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence pep-align/BSNT_01768___comK.1.24716.seq
#    -bsequence pep-align/BPUM_0978___comK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01768___comK-BPUM_0978___comK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01768___comK-BPUM_0978___comK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01768___comK
# 2: BPUM_0978___comK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity:     119/192 (62.0%)
# Similarity:   155/192 (80.7%)
# Gaps:           0/192 ( 0.0%)
# Score: 658.0
# 
#
#=======================================

BSNT_01768___      1 MSQKTDAPLESYEVNGATIAVLPEEIDGKICSKIIEKDCVFYVNMKPLQI     50
                     ||..::.||:||.:|.||:||||.|...::.||:||::..|||.:|||||
BPUM_0978___c      1 MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQI     50

BSNT_01768___     51 VDRSCRFFGSSYAGRKAGTYEVTKISHKPPIMVDPSNQIFLFPTLSSTRP    100
                     ::|||||||||||||||||||||.|||||||::|.||.::.|||.||.||
BPUM_0978___c     51 IERSCRFFGSSYAGRKAGTYEVTGISHKPPIVIDSSNHLYFFPTYSSNRP    100

BSNT_01768___    101 QCGWISHVHVKEFKATEFDDTEVTFSNGKTMELPISYNSFENQVYRTAWL    150
                     |||||||.::..|:.:...||.|.|:|.:|::|.:||.|||:||:|||:|
BPUM_0978___c    101 QCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYL    150

BSNT_01768___    151 RTKFQDRIDHRVPKRQEFMLYPKEERTKMIYDFILRELGERY    192
                     |||||||:|..:||:|||||||||::..::||||||||..||
BPUM_0978___c    151 RTKFQDRLDGGLPKKQEFMLYPKEQQLNLVYDFILRELRNRY    192


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