Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01763 and BPUM_0975
See
DNA alignment /
Visit
BSNT_01763 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence pep-align/BSNT_01763.1.24716.seq
# -bsequence pep-align/BPUM_0975___yhfW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01763-BPUM_0975___yhfW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01763-BPUM_0975___yhfW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01763
# 2: BPUM_0975___yhfW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 510
# Identity: 110/510 (21.6%)
# Similarity: 152/510 (29.8%)
# Gaps: 292/510 (57.3%)
# Score: 597.0
#
#
#=======================================
BSNT_01763 0 -------------------------------------------------- 0
BPUM_0975___y 1 MEQEHKGLEQAKSLWIADSQKHSFPAVHEDLTADVIIVGGGITGIATAFE 50
BSNT_01763 0 -------------------------------------------------- 0
BPUM_0975___y 51 MTERGLDVIIIDADQLLQGTTGHTTAKITSQHDVYYHELIQQIGMPKARL 100
BSNT_01763 1 ---------------MDEHQIECEWIEQDAYLYTANENAVQKIRTEHEAY 35
:.::.|:|:...:||||||..|:.|:|::.|.:||
BPUM_0975___y 101 YVEANENAKELIQARVKKYDIDCQLEVKDAYLYTKEESGVKKLKKELDAY 150
BSNT_01763 36 TKLGIERDLVKDLPIPLGSKLALVMKNQAQFHPLQYLKALLEQIVQKGGR 85
.:|||:|:....||.....|.||.|..|||||||.||.||::|:|::|.|
BPUM_0975___y 151 KQLGIDREWKTSLPFAADIKAALAMTQQAQFHPLHYLNALIDQLVERGVR 200
BSNT_01763 86 IYEETVALDIKKGERPEVVTKSRHAIKSRFIICCSHFPFYDGGGLYAARM 135
|||:|.|:|:|:|.||.|:||..|.:..|:||.|||||||||.|||..|:
BPUM_0975___y 201 IYEQTTAVDVKEGNRPAVITKDGHHLTGRYIISCSHFPFYDGKGLYFTRI 250
BSNT_01763 136 YSDRSYVLAIKPKIEYPEGMYLSIDQPSVALRYTVVNGEKLILFSGVSHK 185
:.::|||:|.|.....|:||||.||||:.:||....:||:::|..|..||
BPUM_0975___y 251 HPEQSYVVAAKTTKPLPDGMYLGIDQPAHSLRTAEWHGEEVVLIGGEGHK 300
BSNT_01763 186 TGQGKDMSTHYETLRQLAESTIGIESIPYYWST----------------- 218
||||.|.|.|||.|.:..|:|:|||.:.|.|||
BPUM_0975___y 301 TGQGGDESAHYEGLERFGEATLGIEEVLYRWSTHDMVTMDQIPYIGRLTK 350
BSNT_01763 218 -------------------------------------------------- 218
BPUM_0975___y 351 HHQNIFVATGFRKWGMTTSHVAATLIGDLIEGKSNPYESIFTPSRPVSDS 400
BSNT_01763 218 -------------------------------------------------- 218
BPUM_0975___y 401 FVKDFVKENSNVAANLISGKLKRTDQTIDDLKPGEGGIVSYEHKKCGAFK 450
BSNT_01763 218 -------------------------------------------------- 218
BPUM_0975___y 451 SEDGNIFLVDTTCTHLGCEVAWNNSDRTWDCPCHGSRFSITGEVVEGPAK 500
BSNT_01763 218 ---------- 218
BPUM_0975___y 501 KPLKRSYKEQ 510
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.