Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01763 and BPUM_0975
See
Amino acid alignment /
Visit
BSNT_01763 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_01763.1.24716.seq
# -bsequence dna-align/BPUM_0975___yhfW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01763-BPUM_0975___yhfW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01763-BPUM_0975___yhfW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01763
# 2: BPUM_0975___yhfW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1594
# Identity: 437/1594 (27.4%)
# Similarity: 437/1594 (27.4%)
# Gaps: 998/1594 (62.6%)
# Score: 1011.5
#
#
#=======================================
BSNT_01763 0 -------------------------------------------------- 0
BPUM_0975___y 1 ATGGAACAAGAACATAAAGGATTGGAACAGGCAAAATCGTTATGGATAGC 50
BSNT_01763 0 -------------------------------------------------- 0
BPUM_0975___y 51 GGATAGTCAAAAGCATTCTTTTCCTGCTGTTCATGAGGATCTCACAGCAG 100
BSNT_01763 0 -------------------------------------------------- 0
BPUM_0975___y 101 ATGTCATCATTGTTGGCGGCGGTATTACCGGTATCGCTACCGCGTTTGAA 150
BSNT_01763 0 -------------------------------------------------- 0
BPUM_0975___y 151 ATGACAGAACGCGGGCTGGATGTCATCATCATTGATGCTGATCAACTGCT 200
BSNT_01763 0 -------------------------------------------------- 0
BPUM_0975___y 201 ACAAGGTACGACTGGACATACGACAGCTAAGATTACCTCACAGCACGATG 250
BSNT_01763 0 -------------------------------------------------- 0
BPUM_0975___y 251 TGTACTACCATGAGCTGATCCAGCAAATTGGTATGCCCAAAGCCCGGTTG 300
BSNT_01763 1 ---------GTGGATGAACAT-CAA--------ATTGAA----------- 21
|.|.||||..|| ||| |||.||
BPUM_0975___y 301 TATGTAGAAGCGAATGAGAATGCAAAAGAGCTGATTCAAGCTCGCGTCAA 350
BSNT_01763 22 ----TGCGA-ATGGATCG--AGC---------AAGACGCATATCTTTATA 55
|.||| ||.|||.| ||| ||||.|||||.||.||||
BPUM_0975___y 351 AAAGTACGACATTGATTGTCAGCTAGAAGTCAAAGATGCATACCTCTATA 400
BSNT_01763 56 CGGCAAATGAA-AACGCTGT-TCAAAAAATCCGCACCGAGCAT--GAGGC 101
||||.||| ||.|..|| |||||||||....|..| |.|| ||.||
BPUM_0975___y 401 ---CAAAGGAAGAAAGTGGTGTCAAAAAATTAAAAAAG-GAATTAGATGC 446
BSNT_01763 102 ATACACAAAGCTCGGAATTGAAAGAGACCTTGTCAAGGATCTTCCAA--- 148
.||||.|.||||.||.|||||..|.|| |.||| ||
BPUM_0975___y 447 CTACAAACAGCTTGGGATTGATCGGGA-------ATGGA------AAACA 483
BSNT_01763 149 ----TTCCCTTAGGT-------TCTAAGCTGGCGCTTGTCATGAAGAATC 187
||||.||.|.| ||.|.||| ||.||.|..||||.|.|.|
BPUM_0975___y 484 TCGCTTCCTTTTGCTGCTGACATCAAGGCT-GCCCTAGCAATGACGCAGC 532
BSNT_01763 188 AAGCTCAATTTCATCCGCTGCAATACTTAAAAGCGCTTCTGGAGCAAATT 237
|.||.||.||.|||||.||.||.|||.|.||.||.||..|.||.||..||
BPUM_0975___y 533 AGGCACAGTTCCATCCCCTTCATTACCTCAATGCACTCATTGACCAGCTT 582
BSNT_01763 238 GTTCAAAAAGGCGGCCGAATTTATGAGGAGACCGTTGCGCTTGATATCAA 287
||..|...|||.|..||.||||||||..||||...|||..||||..|.||
BPUM_0975___y 583 GTAGAGCGAGGTGTACGTATTTATGAACAGACGACTGCTGTTGACGTGAA 632
BSNT_01763 288 AAAAGGCGAAA--GGCCCGAAGTGGTAACTAAAAGCCGGCACGCCATTA- 334
|.||| |||| |.||.|..||..|.|| |||||.|| |||||.|
BPUM_0975___y 633 AGAAG--GAAACCGCCCTGCTGTCATCAC-AAAAGACG----GCCATCAT 675
BSNT_01763 335 -----AGAGCCGCTTTATCATATGCTGTTCCCACTTCCCTTTTTATGACG 379
|| ||||||.||||||.|.||||||.|||||.|||||||||||.|
BPUM_0975___y 676 CTGACAG-GCCGCTATATCATCTCCTGTTCACACTTTCCTTTTTATGATG 724
BSNT_01763 380 GAGGCGGATTATATGCTGCGAGAATGTACTCCGA-CAGATCTTATGTCCT 428
||...|||.|.|||....||.|.||..||.|.|| || |||.|||||..|
BPUM_0975___y 725 GAAAAGGACTTTATTTCACGCGTATTCACCCAGAGCA-ATCGTATGTAGT 773
BSNT_01763 429 TGCCATCAAGCCGA------AGATCGAGTATCCC-GAGGGCATGTATTTG 471
.|| ||||.| |.|.|.| .|||| ||.||.|||||.||.
BPUM_0975___y 774 AGC-----AGCCAAAACAACAAAACCA--CTCCCAGACGGAATGTACTTA 816
BSNT_01763 472 AGTATCGATCAGCC--GTCAGTGGCGCTCCGCTAT----ACGGTTGTAA- 514
.|.||||||||||| .|||.| ||.| ||||..| ||
BPUM_0975___y 817 GGGATCGATCAGCCTGCTCATT---------CTTTAAGAACGGCAG-AAT 856
BSNT_01763 515 ---ACGGTGA-AAAGCTGATTCTCTTCAGCGGAGTAAGCCATAAAACAGG 560
|.||||| .||| ||.|.|||.||.|.||||.|.|.||||||||.||
BPUM_0975___y 857 GGCATGGTGAGGAAG-TGGTGCTCATCGGAGGAGAAGGTCATAAAACTGG 905
BSNT_01763 561 GCA-----GGGAAAAGACATG--TCTACACATTATGAAACACT------- 596
.|| ||| ||| |||.|.||.||||||..|.|
BPUM_0975___y 906 ACAAGGTGGGG-------ATGAATCTGCTCACTATGAAGGATTAGAACGT 948
BSNT_01763 597 ----GAGACAACTAGCC--------GAA-AG------------------- 614
|||| |.|||.|| ||| ||
BPUM_0975___y 949 TTTGGAGA-AGCTACCCTTGGAATTGAAGAGGTACTGTATCGCTGGTCGA 997
BSNT_01763 615 -------------CACCATCGGCATCGAAAGCATTCCATATTATTGGTCC 651
|||.|| |.|||.|| |||.|...||||| ||
BPUM_0975___y 998 CACACGATATGGTCACAAT--GGATCAAA-----TCCCTTACATTGG-CC 1039
BSNT_01763 652 ACCTAA-------------------------------------------- 657
.|||||
BPUM_0975___y 1040 GCCTAACCAAACACCATCAAAATATCTTTGTTGCGACCGGTTTTAGAAAA 1089
BSNT_01763 657 -------------------------------------------------- 657
BPUM_0975___y 1090 TGGGGCATGACGACAAGCCATGTCGCAGCTACTCTTATCGGGGATTTGAT 1139
BSNT_01763 657 -------------------------------------------------- 657
BPUM_0975___y 1140 TGAAGGAAAATCGAATCCATACGAATCCATTTTCACGCCATCAAGACCTG 1189
BSNT_01763 657 -------------------------------------------------- 657
BPUM_0975___y 1190 TATCTGATTCTTTCGTCAAAGATTTCGTTAAAGAAAACAGCAATGTCGCT 1239
BSNT_01763 657 -------------------------------------------------- 657
BPUM_0975___y 1240 GCCAATCTGATCAGTGGTAAATTAAAACGAACCGATCAAACCATTGATGA 1289
BSNT_01763 657 -------------------------------------------------- 657
BPUM_0975___y 1290 TTTAAAGCCAGGAGAAGGCGGCATTGTTTCTTATGAACATAAAAAATGTG 1339
BSNT_01763 657 -------------------------------------------------- 657
BPUM_0975___y 1340 GCGCCTTTAAATCAGAGGACGGGAACATCTTTCTTGTTGATACAACGTGT 1389
BSNT_01763 657 -------------------------------------------------- 657
BPUM_0975___y 1390 ACTCACCTAGGCTGTGAAGTCGCATGGAATAATAGTGACCGCACTTGGGA 1439
BSNT_01763 657 -------------------------------------------------- 657
BPUM_0975___y 1440 TTGTCCTTGTCACGGTTCACGGTTCTCGATTACTGGAGAAGTAGTAGAAG 1489
BSNT_01763 657 -------------------------------------------- 657
BPUM_0975___y 1490 GTCCAGCAAAGAAACCACTAAAAAGGTCTTATAAAGAACAGTAA 1533
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.