Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01756 and BPUM_0973
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence pep-align/BSNT_01756___yhfR.1.24716.seq
# -bsequence pep-align/BPUM_0973___yhfR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01756___yhfR-BPUM_0973___yhfR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01756___yhfR-BPUM_0973___yhfR.aln
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#
# Aligned_sequences: 2
# 1: BSNT_01756___yhfR
# 2: BPUM_0973___yhfR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 111/194 (57.2%)
# Similarity: 147/194 (75.8%)
# Gaps: 1/194 ( 0.5%)
# Score: 603.0
#
#
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BSNT_01756___ 1 MTAVCLVRHGETDWNLQQKCQGKTDIPLNATGERQARETGEYVKDFSWDI 50
||.:|||||||||||..::.||:||||||.||:.||.:||.|:||..||:
BPUM_0973___y 1 MTTICLVRHGETDWNAAKRIQGRTDIPLNDTGKWQAEQTGLYLKDAHWDV 50
BSNT_01756___ 51 IVTSPLKRAKRTAEIINEYLHLPIVEMDDFKERDYGDAEGMPLEERTKRY 100
:::|||.|||.||.:|.:::..|:|.||||.||||||||||..|||.|.:
BPUM_0973___y 51 VISSPLTRAKETAHLILKHVDAPLVLMDDFIERDYGDAEGMSFEERQKLF 100
BSNT_01756___ 101 PDNIYPNMETLEELTDRLMGGLAKVNQAYPNKKVLIVAHGAAIHALLTEI 150
|:..|||||.||.:.||::.|:.||..||||::|||||||||||||||.:
BPUM_0973___y 101 PNKQYPNMEPLETIQDRMVEGIEKVRAAYPNQQVLIVAHGAAIHALLTTL 150
BSNT_01756___ 151 SGGDPELQSTRLVNACLSNIEFAEEKWRIKDYNINSHLSGFIK- 193
:.....|::||||||||:.:|:.:.||::.|||:.|||:....
BPUM_0973___y 151 ADEHLCLENTRLVNACLNYVEWKDGKWKVLDYNVVSHLTQSSPS 194
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