Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01756 and BPUM_0973

See DNA alignment / Visit BSNT_01756 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence pep-align/BSNT_01756___yhfR.1.24716.seq
#    -bsequence pep-align/BPUM_0973___yhfR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01756___yhfR-BPUM_0973___yhfR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01756___yhfR-BPUM_0973___yhfR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01756___yhfR
# 2: BPUM_0973___yhfR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity:     111/194 (57.2%)
# Similarity:   147/194 (75.8%)
# Gaps:           1/194 ( 0.5%)
# Score: 603.0
# 
#
#=======================================

BSNT_01756___      1 MTAVCLVRHGETDWNLQQKCQGKTDIPLNATGERQARETGEYVKDFSWDI     50
                     ||.:|||||||||||..::.||:||||||.||:.||.:||.|:||..||:
BPUM_0973___y      1 MTTICLVRHGETDWNAAKRIQGRTDIPLNDTGKWQAEQTGLYLKDAHWDV     50

BSNT_01756___     51 IVTSPLKRAKRTAEIINEYLHLPIVEMDDFKERDYGDAEGMPLEERTKRY    100
                     :::|||.|||.||.:|.:::..|:|.||||.||||||||||..|||.|.:
BPUM_0973___y     51 VISSPLTRAKETAHLILKHVDAPLVLMDDFIERDYGDAEGMSFEERQKLF    100

BSNT_01756___    101 PDNIYPNMETLEELTDRLMGGLAKVNQAYPNKKVLIVAHGAAIHALLTEI    150
                     |:..|||||.||.:.||::.|:.||..||||::|||||||||||||||.:
BPUM_0973___y    101 PNKQYPNMEPLETIQDRMVEGIEKVRAAYPNQQVLIVAHGAAIHALLTTL    150

BSNT_01756___    151 SGGDPELQSTRLVNACLSNIEFAEEKWRIKDYNINSHLSGFIK-    193
                     :.....|::||||||||:.:|:.:.||::.|||:.|||:.... 
BPUM_0973___y    151 ADEHLCLENTRLVNACLNYVEWKDGKWKVLDYNVVSHLTQSSPS    194


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