Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01744 and BPUM_0970

See DNA alignment / Visit BSNT_01744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence pep-align/BSNT_01744___yhfM.1.24716.seq
#    -bsequence pep-align/BPUM_0970___yhfM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01744___yhfM-BPUM_0970___yhfM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01744___yhfM-BPUM_0970___yhfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01744___yhfM
# 2: BPUM_0970___yhfM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:      47/141 (33.3%)
# Similarity:    83/141 (58.9%)
# Gaps:          16/141 (11.3%)
# Score: 217.0
# 
#
#=======================================

BSNT_01744___      1 MKKIVAAIVVIGLVFIAFFYLYSRSGDVYQSVDADLITLSSSGQEDI--E     48
                     ||||:|.||:.||:.|.|||::||:|:::....|:.:.|||. :|.|  |
BPUM_0970___y      1 MKKILAGIVIFGLLLITFFYVFSRTGEIFDENRAEKLLLSSK-RESISYE     49

BSNT_01744___     49 IEKRQHVKDMLDIMNQGKQVKT---EKTSAPDYEGTIKFHKDRYDSFRLW     95
                     |:.:...:|:::.:|:|||...   :....|||...:.:.:....:|:||
BPUM_0970___y     50 IDDKDTAEDLIEELNKGKQTSNHLKKNLKEPDYIAKVMYGRTNGTTFQLW     99

BSNT_01744___     96 IDGSQQAVFSKDGTYYKLSKNDTKALLNIIKKEAKD-----    131
                     .:.| |.||..|||||:|::..:::    .:|:.|:     
BPUM_0970___y    100 TNRS-QVVFLVDGTYYELNQKQSQS----FQKQLKEAIQKS    135


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