Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01744 and BPUM_0970
See
Amino acid alignment /
Visit
BSNT_01744 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_01744___yhfM.1.24716.seq
# -bsequence dna-align/BPUM_0970___yhfM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01744___yhfM-BPUM_0970___yhfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01744___yhfM-BPUM_0970___yhfM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01744___yhfM
# 2: BPUM_0970___yhfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity: 237/489 (48.5%)
# Similarity: 237/489 (48.5%)
# Gaps: 174/489 (35.6%)
# Score: 520.0
#
#
#=======================================
BSNT_01744___ 1 ATGAAAAAAATAGTGGCAGCCATCGTGGTAATCGGTCTTGTGTTTATCGC 50
|||||.|||||..|.||||..||.|||.|..|.||.|||.|..||||..|
BPUM_0970___y 1 ATGAAGAAAATCCTTGCAGGAATTGTGATCTTTGGACTTTTACTTATTAC 50
BSNT_01744___ 51 ATTTTTTTATCTTTACAGCCGATCAGGCGATGTGTATCAATCGGTAGACG 100
.||.||||||.|.|.|||.||..||||||| ||||
BPUM_0970___y 51 CTTCTTTTATGTATTCAGTCGGACAGGCGA--------AATC-------- 84
BSNT_01744___ 101 CGGATTTGATCACACTGTCTTCAAGCGGCCAGGAAGAT----------AT 140
||||||.| .||.||..|||.||.|| ||
BPUM_0970___y 85 ----TTTGATGA---------GAATCGAGCAGAAAAATTACTCCTTTCAT 121
BSNT_01744___ 141 C-----GAGA-----------TTGAAAAA----------AGACAGCACGT 164
| |||| .|||||.| |.||||||
BPUM_0970___y 122 CTAAAAGAGAATCCATTTCTTATGAAATAGACGATAAGGACACAGCA--- 168
BSNT_01744___ 165 CAAAGATATGCTGGA--TATTATGAATCAGGGAAAACAGGTGAAGACAG- 211
.|||||.|..|.|| .|||| |||.|.||.||||| ||.| ||
BPUM_0970___y 169 -GAAGATTTAATAGAAGAATTA--AATAAAGGCAAACA----AACA-AGT 210
BSNT_01744___ 212 ---------AAAAAACATC----AGCCCCTGATTA-----CGAAGGGACA 243
||.|||.||| ||..||.||||| |.||||
BPUM_0970___y 211 AATCATCTCAAGAAAAATCTAAAAGAACCAGATTATATCGCCAAGG---- 256
BSNT_01744___ 244 ATCAAGTTTCAT---------AAAGACCGGTATGACTCATTCAGACTATG 284
|.|| ||..|.|||.|..|| |.||||| ||.||
BPUM_0970___y 257 --------TGATGTACGGCCGAACAAACGGCACCAC-CTTTCAG-CTTTG 296
BSNT_01744___ 285 GATTGACGGCAGCCAGCAAGCCG------------TTTTTTCGAAGGATG 322
|| |||.||| ||||||.|.| ||||
BPUM_0970___y 297 GA--------------CAAACCGTTCGCAGGTTGTTTTTTTAGTA-GATG 331
BSNT_01744___ 323 GCACATACTACAAATTGAGCAAAAATGATACAAAGGCGCTGCTAAATATT 372
|.||.||.|| ||||| |||..||||..|..| ||.|||.||
BPUM_0970___y 332 GGACTTATTA-----TGAGC-----TGAATCAAAAACAGT-CTCAATCTT 370
BSNT_01744___ 373 ATTAA---------AAAAGAAGC------AAAGGATTGA 396
||.| ||||||||| ||||...|||
BPUM_0970___y 371 -TTCAGAAACAGTTAAAAGAAGCCATTCAAAAGAGCTGA 408
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.