Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01743 and BPUM_0969
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence pep-align/BSNT_01743___yhfL.1.24716.seq
# -bsequence pep-align/BPUM_0969___lcfA1.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01743___yhfL-BPUM_0969___lcfA1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01743___yhfL-BPUM_0969___lcfA1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01743___yhfL
# 2: BPUM_0969___lcfA1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity: 324/536 (60.4%)
# Similarity: 406/536 (75.7%)
# Gaps: 26/536 ( 4.9%)
# Score: 1710.0
#
#
#=======================================
BSNT_01743___ 1 MASIMNDYSFTLRGGRMNLVSKLEETASEKPDSIACRFKDHMMTYQELNE 50
|:|:..||:||..|.:.||..|:.:.|||:||..
BPUM_0969___l 1 ----------------MDLIKNLEQTAMTKREDIALIFEGNQMTYRELMT 34
BSNT_01743___ 51 YIQRFADGLQEAGMEKGDHLALLLGNSPDFIIAFFGALKAGIVVVPINPL 100
.|:||||||...|.:.||||||:|||||.|:|:||||||||:|||||||.
BPUM_0969___l 35 SIERFADGLVSEGFQAGDHLALILGNSPHFVISFFGALKAGLVVVPINPT 84
BSNT_01743___ 101 YTPTEIGYMLTNGDVKAIVGVSQLLPLYESMHESLPKVELVILCQTGEAE 150
|||:||||||..||||.||..:||||:||.::|.||.:|.||:|...|:.
BPUM_0969___l 85 YTPSEIGYMLITGDVKGIVAPAQLLPVYEQVYEQLPSIERVIICAENESA 134
BSNT_01743___ 151 PEAADPEVRMKMTTFAKILRPTSAAKQN--QELVPDDTAVILYTSGTTGK 198
..::..||..::..|.|:: :..||:| ..:..|||||||:|||||||
BPUM_0969___l 135 CRSSFKEVADQLVFFGKLV--SGHAKENVHPSIHQDDTAVILFTSGTTGK 182
BSNT_01743___ 199 PKGAMLTHQNLYSNANDVAGYLGMDERDNVVCALPMFHVFCLTVCMNAPL 248
||||||||.||||||.|||.||.:||:|.|:.||||||||||||||||||
BPUM_0969___l 183 PKGAMLTHFNLYSNARDVAEYLSIDEKDKVIAALPMFHVFCLTVCMNAPL 232
BSNT_01743___ 249 MSGATVLIEPQFSPASVFKLVRQQQATIFAGVPTMYNYLFQHENGKKDDF 298
:.|||:.:.|.|||:.:.:::.:::.|:|.|||||||||::.| |.:|..
BPUM_0969___l 233 IHGATIYVLPHFSPSELLRMMEKEKPTLFVGVPTMYNYLYRQE-GHEDAM 281
BSNT_01743___ 299 SSIRLCISGGAAMPVALLTAFEEKFGVTILEGYGLSEASPVTCFNPFDRG 348
||:|:||||||:||||||..||:|||||:|||||||||||||.|||.|..
BPUM_0969___l 282 SSVRICISGGASMPVALLHGFEKKFGVTVLEGYGLSEASPVTAFNPLDGK 331
BSNT_01743___ 349 RKPGSIGTSILHVENKVVDPLGRELPAHQVGELIVKGPNVMKGYYKMPME 398
|||||:||.|::|:||:|:.||.|:..::|||||.||||:|||||:||.:
BPUM_0969___l 332 RKPGSVGTDIMNVKNKIVNELGEEVGPNEVGELIAKGPNIMKGYYQMPED 381
BSNT_01743___ 399 TEHALKDGWLYTGDLARRDEDGYFYIVDRKKDMIIVGGYNVYPREVEEVL 448
||.||:||||||||||||||:||.||||||||||:|||||||||||||||
BPUM_0969___l 382 TEAALRDGWLYTGDLARRDEEGYIYIVDRKKDMILVGGYNVYPREVEEVL 431
BSNT_01743___ 449 YSHPDVKEAVVIGVPDPQSGEAVKGYVVPKR-SGVTEEDIMQHCEKHLAK 497
|.|..|.|||||||||..:||||..|:.||: :.:.:|||:.||.:.|||
BPUM_0969___l 432 YQHEAVAEAVVIGVPDQNTGEAVVCYISPKKHAHIDQEDIITHCSRFLAK 481
BSNT_01743___ 498 YKRPAAITFLDDIPKNATGKMLRRALRDILPQ---- 529
||:|..|.|:||||||.|||:|||||::....
BPUM_0969___l 482 YKQPQTIHFIDDIPKNTTGKILRRALKEKYQAEESK 517
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