Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01730 and BPUM_0962

See DNA alignment / Visit BSNT_01730 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence pep-align/BSNT_01730___yhgE.1.24716.seq
#    -bsequence pep-align/BPUM_0962___yhgE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01730___yhgE-BPUM_0962___yhgE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01730___yhgE-BPUM_0962___yhgE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01730___yhgE
# 2: BPUM_0962___yhgE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 778
# Identity:     426/778 (54.8%)
# Similarity:   555/778 (71.3%)
# Gaps:          12/778 ( 1.5%)
# Score: 2162.0
# 
#
#=======================================

BSNT_01730___      1 MNTIRSQWKDIVTSKKLLIPIIAILFVPLIYSGVFLKAYWDPYGTVDQLP     50
                     ||.||:|||||||||||||||:|:||:|||||||||||||||||||||||
BPUM_0962___y      1 MNLIRNQWKDIVTSKKLLIPILAVLFIPLIYSGVFLKAYWDPYGTVDQLP     50

BSNT_01730___     51 VVVVNQDKGATYEGEKLQIGDDLVKELKDNNNFDWHFSNDLDQSLKDLLN    100
                     |.|||.|:|:.|:|:.||:|||||||||.|:||.|:|.:..|::||.|.|
BPUM_0962___y     51 VAVVNLDEGSHYDGKTLQVGDDLVKELKKNDNFKWNFVDSHDKALKGLNN    100

BSNT_01730___    101 QKYYLVVEIPEDFSKNASTVLDKNPKKLDLKYHTNAGSNYVGATIGEKAI    150
                     :.||||||||:||||||||||:|:|||.:|||:||.|:||..:.|...||
BPUM_0962___y    101 EDYYLVVEIPKDFSKNASTVLEKHPKKSNLKYYTNPGANYAASQIANNAI    150

BSNT_01730___    151 DKLKASVSKEVTEQYTKVIFDNFKDIAKGLSDASSGAKKIDDGTKDAKNG    200
                     .|||.|||||||:.|.:|||||||.|||||..||.||||||||||.||:|
BPUM_0962___y    151 IKLKDSVSKEVTKNYAEVIFDNFKTIAKGLDQASDGAKKIDDGTKSAKDG    200

BSNT_01730___    201 SAQLKENLAKLKESTATISDKTAQLADGAAQVTSGIQSLDSSLGKFQDSS    250
                     |.:||:|||||.|.|.|.|:...|.|....::.:|||||||.||:.....
BPUM_0962___y    201 STKLKDNLAKLAEGTLTYSEGVHQFAGKMGELNTGIQSLDSGLGQLLTGY    250

BSNT_01730___    251 NQIYDKSSQLAAGSGKITGKLNELNAGLQKVQQGLPNLTNGLDQLNSKAQ    300
                     ..|..|..:|.:|...:|..||....|.|::...:|..|.|::|||:|||
BPUM_0962___y    251 QTIDQKFGELGSGIDTLTEGLNTSREGHQQLASKMPQFTAGIEQLNNKAQ    300

BSNT_01730___    301 EGSEKAAKAEKLINALDLTKLETAVNNLEKSETAMKEFKKQLSDFENSLK    350
                     ..|||.|..||::::.:|..||.....|::.:...|.|..:|:..:.:|.
BPUM_0962___y    301 SFSEKIAAVEKVLSSPELANLEKMAPKLDQVKKDAKTFSTKLASLKEALS    350

BSNT_01730___    351 NRDQAFKNLINSSDFLTAEQKS---QLISSVEKQLPKVDAPDFDEILSGL    397
                     |||...|::|.:|.....|:|:   ||.|     |||::.||...:...|
BPUM_0962___y    351 NRDAKVKSIIQNSSMTDEEKKAATDQLNS-----LPKIELPDLSGLEQSL    395

BSNT_01730___    398 PSADQLPDIATIKSSLEDVKAQVAQVKALPEATSKLYNGAKATQDAIDKL    447
                     .:..:|||.:.::|::...|||:.|||.|||.|.:||....|.|:|||::
BPUM_0962___y    396 AALQELPDASEVQSAVASAKAQLQQVKQLPEKTEQLYTSTVAIQNAIDQM    445

BSNT_01730___    448 TAGSEKLYNASQQVTDGQTKLTAGIGEYNKQFAKAKAGSEQLVTGSSQVS    497
                     |:|:.|||..:.::..||.:|..|:...|.:...||:|:::|..||||:|
BPUM_0962___y    446 TSGTNKLYQGALKLQTGQGQLQDGLETANGKLDTAKSGADKLANGSSQLS    495

BSNT_01730___    498 GGLFKLLDGSKQVQSGSSKLADGSASLDTGLGKLLDGTGELSSKLKDAAD    547
                     ..|.||..||..:||.:||||:||.|||.||..|..|||:||:|||.|||
BPUM_0962___y    496 AALNKLESGSTNIQSNTSKLAEGSKSLDKGLEDLKSGTGKLSNKLKSAAD    545

BSNT_01730___    548 QTGDIDADDQTYGMFADPVKTKDDAIHSVPNYGTGLTPYILSMGLYVGGI    597
                     :||.|||:...|.|.|.||||::|....:.|||||||||||||||:||.:
BPUM_0962___y    546 ETGKIDANQDNYNMIASPVKTENDTAKKIDNYGTGLTPYILSMGLFVGAL    595

BSNT_01730___    598 MLTVVFPLKEASGRPRNGFEWFFSKFNVMMLVGIIQSLIVATVLLLGIGL    647
                     |||||||:|:.:|||||.||||.||::|::||||:|::|.:|:|:.|:||
BPUM_0962___y    596 MLTVVFPMKDPAGRPRNAFEWFVSKYSVLLLVGILQAVIASTMLIFGLGL    645

BSNT_01730___    648 EVESTWRFYVFTIITSLAFLAMIQFLATTMGNPGRFIAVIILVLQLGASG    697
                     ||||.||||:|.|:.||.|||:||.|||||||||||||||||||||.||.
BPUM_0962___y    646 EVESLWRFYLFAIVVSLTFLAIIQLLATTMGNPGRFIAVIILVLQLAASA    695

BSNT_01730___    698 GTFPLELLPNFYQVIHGALPMTYSINGFRAVISNGDFGYMWQMAGVLIGI    747
                     |||||||:|.|:||||..|||||:|||||.:|::||..|:|..|.:|..:
BPUM_0962___y    696 GTFPLELVPKFFQVIHSLLPMTYTINGFRTIIASGDDSYLWHQAAILGTV    745

BSNT_01730___    748 ALVMIALSITYFTMLSRKEETSEEQRAS    775
                     |::|:|.:..||....||.:..|.    
BPUM_0962___y    746 AIIMMAATTAYFAWNVRKMKQDEA----    769


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01730 and BPUM_0962

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
