Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01729 and BPUM_0961
See
DNA alignment /
Visit
BSNT_01729 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence pep-align/BSNT_01729___yhgD.1.24716.seq
# -bsequence pep-align/BPUM_0961___yhgD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01729___yhgD-BPUM_0961___yhgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01729___yhgD-BPUM_0961___yhgD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01729___yhgD
# 2: BPUM_0961___yhgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 140/192 (72.9%)
# Similarity: 168/192 (87.5%)
# Gaps: 1/192 ( 0.5%)
# Score: 730.0
#
#
#=======================================
BSNT_01729___ 1 MSIDRKKLILEAATKSFTQFGYKATTMDLVAKLANVGKGTIYTFFKNKEE 50
||:||:::||:.|||:||||||||||||||||||||||||||||||||||
BPUM_0961___y 1 MSVDRRQMILDGATKAFTQFGYKATTMDLVAKLANVGKGTIYTFFKNKEE 50
BSNT_01729___ 51 LFDEIFTTLLKEMKQKADEAMEPNLPFHENVHRALFAILEFRKTHQLTIK 100
|||||||:||.||::.||||::....|.||:|.||||||||||.||||||
BPUM_0961___y 51 LFDEIFTSLLLEMRKIADEAIDEKNSFSENLHLALFAILEFRKNHQLTIK 100
BSNT_01729___ 101 IFQENAEIGTMAVQEVIQKMERAILSYIKSKIEDGIKSGAIKPCDPELTA 150
|||||||:||.||:|:|:|||:.|:.|||:|:::.:..|.||||||||||
BPUM_0961___y 101 IFQENAELGTSAVKEMIEKMEQMIIRYIKTKVQEAMDKGDIKPCDPELTA 150
BSNT_01729___ 151 FVMLKLYIALIFDWEKQHPPLDKETIAGLLELYVVKGLSAN- 191
|||:||||||||||||::.||.||.:|..|||||:|||||.
BPUM_0961___y 151 FVMVKLYIALIFDWEKRYEPLTKEEVAESLELYVLKGLSATT 192
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.