Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01727 and BPUM_0959

See DNA alignment / Visit BSNT_01727 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence pep-align/BSNT_01727___hemH.1.24716.seq
#    -bsequence pep-align/BPUM_0959___hemH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01727___hemH-BPUM_0959___hemH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01727___hemH-BPUM_0959___hemH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01727___hemH
# 2: BPUM_0959___hemH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     263/312 (84.3%)
# Similarity:   288/312 (92.3%)
# Gaps:           2/312 ( 0.6%)
# Score: 1417.0
# 
#
#=======================================

BSNT_01727___      1 MSRKKMGLLVMAYGTPYKEEDIERYYTHIRRGRKPEPEMLQDLKDRYEAI     50
                     |.:||||||||||||||||||||||||||||||||||||||||||||:||
BPUM_0959___h      1 MEKKKMGLLVMAYGTPYKEEDIERYYTHIRRGRKPEPEMLQDLKDRYKAI     50

BSNT_01727___     51 GGISPLAKITEEQAHNLEQHLNEIQDEITFKAYIGLKHIEPFIEDAVAEM    100
                     ||||||:||||:|||.|.:|||:|||:|.|..||||||||||||||||:|
BPUM_0959___h     51 GGISPLSKITEQQAHGLCEHLNDIQDDIEFHVYIGLKHIEPFIEDAVADM    100

BSNT_01727___    101 HKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLGGLTITSVESWYDE    150
                     ||||||||||||||||||||||:||||||::||:|||.|.||||||||||
BPUM_0959___h    101 HKDGITEAVSIVLAPHFSTFSVKSYNKRAQDEADKLGNLQITSVESWYDE    150

BSNT_01727___    151 PKFVKYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQL    200
                     ||||.|||.:||:|||||.::||::|:||||||||||||...||||||||
BPUM_0959___h    151 PKFVDYWVKQVKDTYASMSQEERDSAVLIVSAHSLPEKIIAAGDPYPDQL    200

BSNT_01727___    201 HESAKLIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQA    250
                     .:|||:||||||:..|.:|||||||||||||||||||||||||||||||.
BPUM_0959___h    201 AQSAKMIAEGAGIEHYEIGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQT    250

BSNT_01727___    251 FVYVPVGFVADHLEVLYDNDYECKVVTDDIGASYYRPEMPNAKPEFIDAL    300
                     ||||||||||||||||||||||||||||:|||:|||||||||||.|||||
BPUM_0959___h    251 FVYVPVGFVADHLEVLYDNDYECKVVTDEIGAAYYRPEMPNAKPAFIDAL    300

BSNT_01727___    301 ATVVLKKLGR--    310
                     ||||||||..  
BPUM_0959___h    301 ATVVLKKLDESK    312


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