Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01727 and BPUM_0959
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence dna-align/BSNT_01727___hemH.1.24716.seq
# -bsequence dna-align/BPUM_0959___hemH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01727___hemH-BPUM_0959___hemH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01727___hemH-BPUM_0959___hemH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01727___hemH
# 2: BPUM_0959___hemH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 954
# Identity: 729/954 (76.4%)
# Similarity: 729/954 (76.4%)
# Gaps: 36/954 ( 3.8%)
# Score: 2733.0
#
#
#=======================================
BSNT_01727___ 1 GT-GAGTAGAAAGAAAATGGGGCTTCTCGTGATGGCGTACGGCACGCCTT 49
|| ||| |.||||||||||||||||||.||.|||||.||.|||||.||.|
BPUM_0959___h 1 GTGGAG-AAAAAGAAAATGGGGCTTCTTGTCATGGCATATGGCACCCCGT 49
BSNT_01727___ 50 ATAAGGAAGAAGATATTGAACGTTATTATACACATATCAGAAGAGGCAGA 99
||||.||||||||.|||||.|||||||||||||||||..|.|||||||||
BPUM_0959___h 50 ATAAAGAAGAAGACATTGAGCGTTATTATACACATATTCGTAGAGGCAGA 99
BSNT_01727___ 100 AAGCCTGAACCTGAAATGCTTCAAGATTTGAAAGACAGATACGAAGCGAT 149
|||||.||.||.||||||||.||||||||.||.||..|.|||.|.||.||
BPUM_0959___h 100 AAGCCGGAGCCGGAAATGCTGCAAGATTTAAAGGATCGCTACAAGGCAAT 149
BSNT_01727___ 150 TGGCGGCATTTCACCGCTTGCCAAAATCACAGAAGAGCAGGCGCA----T 195
.|||||.|||||.||..|..|.|||||.|||||..|||||||.|| |
BPUM_0959___h 150 CGGCGGTATTTCTCCTTTATCAAAAATTACAGAGCAGCAGGCACATGGTT 199
BSNT_01727___ 196 AATCTGGAACAGCACTTGAATGAAATTCAGGATGAGATTACGTTTAAAGC 245
.||.|| |||||||||||||.|||||.||.||.|||...|||.|.|.
BPUM_0959___h 200 TATGTG----AGCACTTGAATGATATTCAAGACGATATTGAATTTCATGT 245
BSNT_01727___ 246 GTATATCGGACTGAAGCATATCGAGCCGTTTATTGAAGACGCCGTAGCAG 295
|||.||.||..|.||.|||||||||||.||.||.||.||.||.||.||.|
BPUM_0959___h 246 GTACATTGGCTTAAAACATATCGAGCCTTTCATCGAGGATGCAGTTGCTG 295
BSNT_01727___ 296 AGATGCATAAGGATGGCATTACAGAAGCAGTCAGCATCGTGCTGGCGCCG 345
|.|||||.|||||.||||||||||||||.||.||.|||||..|.||||||
BPUM_0959___h 296 ACATGCACAAGGACGGCATTACAGAAGCTGTGAGTATCGTTTTAGCGCCG 345
BSNT_01727___ 346 CATTTCTCCACGTTCAGCGTTCAGTCCTACAACAAACGTGCCAAAGAAGA 395
|||||||||||.||.||.||..|.||.||.|||||||||||..||||.||
BPUM_0959___h 346 CATTTCTCCACATTTAGTGTGAAATCGTATAACAAACGTGCACAAGATGA 395
BSNT_01727___ 396 GGCTGAAAAACTCGGCGGCTTAACGATTACGTCAGTTGAAAGCTGGTACG 445
|||.||.||.||||||....||..||||||.||.||||||||||||||||
BPUM_0959___h 396 GGCAGACAAGCTCGGCAATCTACAGATTACATCTGTTGAAAGCTGGTACG 445
BSNT_01727___ 446 ATGAACCGAAGTTCGTGAAATATTGGGTTGACCGAGTGAAGGAAACATAT 495
||||.||||||||.|||.|.||||||||..|.|.|||||||||.||.|||
BPUM_0959___h 446 ATGAGCCGAAGTTTGTGGACTATTGGGTGAAGCAAGTGAAGGATACGTAT 495
BSNT_01727___ 496 GCGTCAATGCCTGAGGATGAAAGAGAAAACGCGATGCTCATCGTATCCGC 545
||.||||||..|.|.||.||||||||...|||..|.||.||.|||||.||
BPUM_0959___h 496 GCATCAATGAGTCAAGAGGAAAGAGATTCCGCAGTACTTATTGTATCTGC 545
BSNT_01727___ 546 ACACAGCCTGCCGGAAAAAATCAAAGAATTTGGAGACCCGTATCCGGACC 595
|||||||||.||.||||||||.|..|.|...|||||.||.|||||.||.|
BPUM_0959___h 546 ACACAGCCTCCCTGAAAAAATTATTGCAGCAGGAGATCCATATCCTGATC 595
BSNT_01727___ 596 AGCT-GCATGAATCGGCGAAATTGATTGCTGAAGGCGCAGGCGTTTCCGA 644
|||| ||| .||||.||.|||.|||||||.|||||||||||..|| ||
BPUM_0959___h 596 AGCTCGCA-CAATCTGCCAAAATGATTGCAGAAGGCGCAGGAATT---GA 641
BSNT_01727___ 645 A---TATGCTGTCGGCTGGCAAAGTGAAGGGAACACGCCTGATCCTTGGC 691
| ||||...|.|||||||||||||||||.||.||.||.||.||.||||
BPUM_0959___h 642 ACACTATGAAATTGGCTGGCAAAGTGAAGGCAATACACCGGACCCATGGC 691
BSNT_01727___ 692 TCGGACCCGATGTTCAGGATTTAACACGTGATTTATTCGAACAAAAAGGC 741
|.|||||.||.||.||.||.|||||.||.||.|||||.||||||||||||
BPUM_0959___h 692 TTGGACCAGACGTACAAGACTTAACGCGGGACTTATTTGAACAAAAAGGC 741
BSNT_01727___ 742 TATCAAGCATTTGTATATGTTCCTGTTGGATTTGTCGCGGATCA-CTTAG 790
||||||.||||.||.|||||.||||||||.||||||||.||||| ||| |
BPUM_0959___h 742 TATCAAACATTCGTGTATGTGCCTGTTGGGTTTGTCGCTGATCATCTT-G 790
BSNT_01727___ 791 AAGTGCTT-TATGATAATGATTATGAATGCAAAGTGGTGACTGACGATAT 839
|.|| ||| ||.||.||.|||||||||||.|||||.|||||.||.||.||
BPUM_0959___h 791 AGGT-CTTATACGACAACGATTATGAATGTAAAGTCGTGACAGATGAAAT 839
BSNT_01727___ 840 CGGCGCAAGCTATTACCGGCCGGAAATGCCAAATGCCAAGCCTGAATTTA 889
|||.|||..|||.||.||.||.||||||||||||||.||.||.|.|||||
BPUM_0959___h 840 CGGTGCAGCCTACTATCGTCCAGAAATGCCAAATGCGAAACCAGCATTTA 889
BSNT_01727___ 890 TTGATGCTTTGGCAACAGTCGTATTAAA-AAAATTAGGACGTTAA----- 933
||||||||.|||||||.||||||||||| ||..|| |||| ||
BPUM_0959___h 890 TTGATGCTCTGGCAACCGTCGTATTAAAGAAGCTT--GACG--AAAGCAA 935
BSNT_01727___ 933 ---- 933
BPUM_0959___h 936 GTAA 939
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