Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01723 and BPUM_0956

See DNA alignment / Visit BSNT_01723 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_01723___yhgC.1.24716.seq
#    -bsequence pep-align/BPUM_0956.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01723___yhgC-BPUM_0956.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01723___yhgC-BPUM_0956.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01723___yhgC
# 2: BPUM_0956
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity:      86/169 (50.9%)
# Similarity:   115/169 (68.0%)
# Gaps:          11/169 ( 6.5%)
# Score: 436.5
# 
#
#=======================================

BSNT_01723___      1 MKVYITYGTADFLKTIVQKHPSENILLMQGQENAILIHETNGDTVFQAPH     50
                     |.||:||||||||..|.:||..||:|.|.|:|.|.|.|||.|:|||:|||
BPUM_0956          1 MNVYMTYGTADFLHKIAKKHDQENLLYMDGKEQAALFHETEGETVFKAPH     50

BSNT_01723___     51 AYEVIDQVGEIKHPGFAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFE    100
                     ||:||...||:.|.||..||:|.|..|.|.|||:.||.:....|::.||:
BPUM_0956         51 AYDVIYAKGELAHSGFVTLNHIPVKLESRALFESTFKKKTHISEHQRGFK    100

BSNT_01723___    101 AIRVLRP-LDSDTYVILTLWETESAFQDWQQSGSYKEAHKKRDTSAGIDT    149
                     |:||||| .|.:.|:|:||||:|..|:|:|:|.::.:.:.        ||
BPUM_0956        101 ALRVLRPKKDEEVYLIMTLWESEDLFEDFQESEAFFQPND--------DT    142

BSNT_01723___    150 TSIFSRPSYVTTYFAVE--    166
                     .||||||:|:|:|.||.  
BPUM_0956        143 GSIFSRPAYLTSYHAVTDN    161


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