Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01718 and BPUM_0954
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence pep-align/BSNT_01718___yhaA.1.24716.seq
# -bsequence pep-align/BPUM_0954___amaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01718___yhaA-BPUM_0954___amaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01718___yhaA-BPUM_0954___amaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01718___yhaA
# 2: BPUM_0954___amaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 271/396 (68.4%)
# Similarity: 321/396 (81.1%)
# Gaps: 1/396 ( 0.3%)
# Score: 1469.0
#
#
#=======================================
BSNT_01718___ 1 MSISTLQKEINKQLDSCFEEMVEIRRHIHMYPELSFQEEKTAAFIASYYE 50
|:||||||.||::||..:|||||||||:||.||||||||:|||||||||:
BPUM_0954___a 1 MTISTLQKSINERLDEHYEEMVEIRRHLHMNPELSFQEEETAAFIASYYD 50
BSNT_01718___ 51 SLGVPIRTNVGGRGVLAYIEGSEPGPTVALRADFDALPIQDEKDVPYASK 100
.|.:|.||.|||.||||:|||:.||||:|||||||||||.|||:|||.|.
BPUM_0954___a 51 KLHIPTRTQVGGHGVLAFIEGTSPGPTIALRADFDALPIHDEKEVPYKST 100
BSNT_01718___ 101 VPGVMHACGHDGHTAALLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGA 150
.||||||||||||||.||.:||:|:::|.:|||..|:||||||||.||||
BPUM_0954___a 101 KPGVMHACGHDGHTATLLVLAKILNEHRDQLKGKIVLIHQHAEEYAPGGA 150
BSNT_01718___ 151 KPMIDDGCLENADVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGK 200
||||:||||:..|||||||||:.||.||:|.:.|..|||||||:|:|.||
BPUM_0954___a 151 KPMIEDGCLDGVDVIFGTHLWSPEPCGTVLYKSGNFMAAADRFSIRVQGK 200
BSNT_01718___ 201 GGHGAHPHDTKDAVLIGSQIVTSLQHIVSRKVNPIQSAVISTGSFIADNP 250
|||||.||.||||||||||||.:||.:|:|||||:.|||:|.|.|:|:|.
BPUM_0954___a 201 GGHGAQPHLTKDAVLIGSQIVANLQQVVARKVNPVDSAVVSVGGFVAENA 250
BSNT_01718___ 251 FNVIADQAVLIGTARSFDENVRDILEKEIEAVVKGICSMHGASYEYTYEQ 300
||||||.|||.||||||:|:.|..:|:|||.||.|:|:||.|.|.|.|.:
BPUM_0954___a 251 FNVIADSAVLTGTARSFEESARHTIEREIEQVVNGVCAMHDAGYTYEYVR 300
BSNT_01718___ 301 GYPAVVNHPAETSHLVSTAKNTEGVQQVIDGEPQMGGEDFSYYLQNVKGT 350
|||||.|||..|..:...||.|:||.:|.:.|.|||||||:||||:|.||
BPUM_0954___a 301 GYPAVKNHPKPTEFIADIAKQTDGVIEVKEAETQMGGEDFAYYLQHVPGT 350
BSNT_01718___ 351 FFFTGAAPEQPDRVYSHHHPKFDINEKAMLTAAKVLAGAAITYHQL 396
||:|||.||..|..|.|||||||||||||..||||||.|.::|.:
BPUM_0954___a 351 FFYTGAMPENSDDAYPHHHPKFDINEKAMPVAAKVLASAVLSYDE- 395
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