Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01716 and BPUM_0953

See DNA alignment / Visit BSNT_01716 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_01716___ecsC.1.24716.seq
#    -bsequence pep-align/BPUM_0953___ecsC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01716___ecsC-BPUM_0953___ecsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01716___ecsC-BPUM_0953___ecsC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01716___ecsC
# 2: BPUM_0953___ecsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     134/237 (56.5%)
# Similarity:   176/237 (74.3%)
# Gaps:           3/237 ( 1.3%)
# Score: 701.0
# 
#
#=======================================

BSNT_01716___      1 -MTDNQLLMQEALEWKMHFLRKDSMFERFSKRVQTKVNERIPEKIHTVVT     49
                      ....:.|.:||:.::..||||.|..||.||.||.:||.|||.:.|.|:|
BPUM_0953___e      1 MNAAERELYEEAILFQTRFLRKPSKIERISKGVQQQVNRRIPARFHQVIT     50

BSNT_01716___     50 ESVRKMVEATMAGSNIITYKKDTSALSLSEKNELAKKTIVSYQKVAAAEG     99
                     .:|:.|||:|::||:..::......||:.|:|||||:.:..|||.||.||
BPUM_0953___e     51 SAVKTMVESTVSGSHFTSFTVMDEQLSIIERNELAKEKVKYYQKAAAIEG    100

BSNT_01716___    100 VGTGAGGIFLGIADFPLLLSIKMKCLFTLSSIYGFDVKDAQERMFLLLVF    149
                     :|||||||.||:||||||||||||||:.|:.|||||:...:||:|||.:|
BPUM_0953___e    101 IGTGAGGILLGMADFPLLLSIKMKCLYELACIYGFDLSQKEERLFLLCIF    150

BSNT_01716___    150 QLAFSSDDGRKSLFSVIENWETEKKCIDWRVFQQEYRDYIDVVKLFQLLP    199
                     |||||....|:.:.|:|::|||.::.:||..||||||||||:||||||:|
BPUM_0953___e    151 QLAFSGSAHRQKMMSIIDDWETSREEMDWYSFQQEYRDYIDLVKLFQLMP    200

BSNT_01716___    200 GVGAAVGGIANYKLLAQLGETARHVFHLRILKEKAGE    236
                     .|||||||:||:.|..|||:.||||||||:||||.  
BPUM_0953___e    201 VVGAAVGGVANHHLTGQLGDVARHVFHLRVLKEKK--    235


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