Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01710 and BPUM_0949

See DNA alignment / Visit BSNT_01710 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_01710___hit.1.24716.seq
#    -bsequence pep-align/BPUM_0949___hit.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01710___hit-BPUM_0949___hit.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01710___hit-BPUM_0949___hit.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01710___hit
# 2: BPUM_0949___hit
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:     111/145 (76.6%)
# Similarity:   122/145 (84.1%)
# Gaps:           3/145 ( 2.1%)
# Score: 600.0
# 
#
#=======================================

BSNT_01710___      1 MHCAENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHI     50
                        ..:|||||||.||||.||||||||||||||||||||||||||||.|.
BPUM_0949___h      1 ---MSDCIFCKIIDGDIPCAKVYEDEHVLAFLDISQVTKGHTLVIPKIHK     47

BSNT_01710___     51 ENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFH    100
                     ||:|:.|.|::..||.|:|||||||:.||||||||.||||||||||||||
BPUM_0949___h     48 ENIYDMTPEVSNHYFQAIPKIARAIKQEFEPIGLNLLNNNGEKAGQSVFH     97

BSNT_01710___    101 YHMHIIPRYGKGDGFGAVWKTHADDYKPEDLQNISSSIAKRLASS    145
                     ||||||||||||||||||||:|.|.|..|||::|||:|..||.||
BPUM_0949___h     98 YHMHIIPRYGKGDGFGAVWKSHQDQYTSEDLKDISSAIHTRLTSS    142


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