Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01710 and BPUM_0949
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_01710___hit.1.24716.seq
# -bsequence dna-align/BPUM_0949___hit.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01710___hit-BPUM_0949___hit.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01710___hit-BPUM_0949___hit.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01710___hit
# 2: BPUM_0949___hit
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 318/448 (71.0%)
# Similarity: 318/448 (71.0%)
# Gaps: 29/448 ( 6.5%)
# Score: 1118.0
#
#
#=======================================
BSNT_01710___ 1 ATGCATTGTGCAGAAAATTGTATCTTTTGTAAAATTATCGCCGGCGACAT 50
||| || ..|||||||.|||||.||.||.||.|..||.|||||
BPUM_0949___h 1 -------GTG-AG-CGATTGTATTTTTTGCAAGATCATTGATGGAGACAT 41
BSNT_01710___ 51 TCCATCCGCGAAGGTGTATGAAGATGAACATGTACTTGCCTTTCTTGATA 100
|||||..||.||.||.||||||||.||.||||||.|.||.|||||.||||
BPUM_0949___h 42 TCCATGTGCAAAAGTATATGAAGACGAGCATGTATTGGCTTTTCTAGATA 91
BSNT_01710___ 101 TCAGCCAAGTGACAAAAGGCCATACGCTTGTCATTCCGAAAACACATATT 150
|.||||||||.||||||||.|||||.|||||.||.|||||||.|||||..
BPUM_0949___h 92 TTAGCCAAGTAACAAAAGGGCATACCCTTGTAATCCCGAAAATACATAAA 141
BSNT_01710___ 151 GAGAATGTATATGAATTTACAGATGAATTAGCAAAACAATATTTCCATGC 200
||.||..|.|||||..|.|||...|||.|..|.||.||.||.|||||.||
BPUM_0949___h 142 GAAAACATCTATGACATGACACCAGAAGTGTCTAATCACTACTTCCAAGC 191
BSNT_01710___ 201 TGTTCCGAAAATCGCCCGCGCTATCCGGGATGAATTTGAACCGATCGGCT 250
..||||||||||.||..|.||.|||....|.|||||||||||.||.||.|
BPUM_0949___h 192 GATTCCGAAAATTGCAAGGGCGATCAAACAGGAATTTGAACCCATTGGAT 241
BSNT_01710___ 251 TAAA-----TACGCTGAACAATAACGGCGAAAAAGCTGGACAATCTGTGT 295
|||| || |||||.||.|||||||||||||||||||||||||
BPUM_0949___h 242 TAAACCTTTTA-----AACAACAATGGCGAAAAAGCTGGACAATCTGTGT 286
BSNT_01710___ 296 TCCACTACCATATGCATATTATCCCTCGCTACGGAAAAGGAGATGGATTC 345
||||.|||||.||||||||.||.||.||.|||||.|||||.|||||.||.
BPUM_0949___h 287 TCCATTACCACATGCATATCATTCCGCGTTACGGCAAAGGCGATGGCTTT 336
BSNT_01710___ 346 GGAGCGGTTTGGAAAACGCATGCTGATGATTATAAACCGGAGGATCTGCA 395
||.||.||.||||||.|.|||...|||.|.||||...|.||||||.|..|
BPUM_0949___h 337 GGTGCCGTATGGAAATCACATCAAGATCAATATACGTCAGAGGATTTAAA 386
BSNT_01710___ 396 GAACATCTCTTCCTCTAT-----CGCAAAACGCCTGGCCTCATCATAA 438
..||||.|||||..|.|| || |||||..|||||||.|||
BPUM_0949___h 387 AGACATTTCTTCTGCCATTCATACG-----CGCCTTACCTCATCTTAA 429
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