Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01709 and BPUM_0948

See DNA alignment / Visit BSNT_01709 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence pep-align/BSNT_01709___serC.1.24716.seq
#    -bsequence pep-align/BPUM_0948___serC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01709___serC-BPUM_0948___serC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01709___serC-BPUM_0948___serC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01709___serC
# 2: BPUM_0948___serC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 359
# Identity:     269/359 (74.9%)
# Similarity:   313/359 (87.2%)
# Gaps:           0/359 ( 0.0%)
# Score: 1428.0
# 
#
#=======================================

BSNT_01709___      1 MERTTNFNAGPAALPLEVLQKAQKEFIDFNESGMSVMELSHRSKEYEAVH     50
                     |:|||||||||||||||||:|||:|.:||.::|||||||||||.|||.||
BPUM_0948___s      1 MKRTTNFNAGPAALPLEVLKKAQEELVDFKQTGMSVMELSHRSGEYEEVH     50

BSNT_01709___     51 QKAKSLLIELMGIPEDYDILFLQGGASLQFSMLPMNFLTPEKTAHFVMTG    100
                     .||||||:|||.|||:|::|||||||||||:|:|||||...:||||:.||
BPUM_0948___s     51 NKAKSLLVELMDIPENYEVLFLQGGASLQFAMIPMNFLHEGETAHFIQTG    100

BSNT_01709___    101 AWSEKALAETKLFGNTSITATSETDNYSYIPEVDLTDVKDGAYLHITSNN    150
                     |||||||:|.|.||.||:.|:||.||||||||||.:.:.|||||||||||
BPUM_0948___s    101 AWSEKALSEAKGFGETSVFASSEDDNYSYIPEVDASALTDGAYLHITSNN    150

BSNT_01709___    151 TIFGTQWQEFPNSPIPLVADMSSDILSRKIDVSKFDVIYGGAQKNLGPSG    200
                     |||||||:.||.:.:||:|||||||||:|||||:||:||.||||||||||
BPUM_0948___s    151 TIFGTQWKTFPGTSLPLIADMSSDILSKKIDVSQFDLIYAGAQKNLGPSG    200

BSNT_01709___    201 VTVVIMKKSWLKNENANVPKILKYSTHVKADSLYNTPPTFAIYMLSLVLE    250
                     :|:||.:|..|:.|..:.|||||||||.||.|||:||||||||||||||:
BPUM_0948___s    201 ITIVIARKRLLEKEKKSTPKILKYSTHAKAGSLYHTPPTFAIYMLSLVLD    250

BSNT_01709___    251 WLKENGGVEAVEQRNEQKAQVLYSCIDESNGFYKGHARKDSRSRMNVTFT    300
                     .:|:.|||||.|:||||||.:||..||:|.||||||||.||||.||||||
BPUM_0948___s    251 HVKQAGGVEAAEKRNEQKAGILYDTIDQSGGFYKGHARTDSRSHMNVTFT    300

BSNT_01709___    301 LRDDELTKTFVQKAKDAKMIGLGGHRSVGGCRASIYNAVSLEDCEKLAAF    350
                     ||||.||.:||:|||..:|:||.|||||||||||||||||:|||:|||.|
BPUM_0948___s    301 LRDDALTASFVEKAKHEQMVGLAGHRSVGGCRASIYNAVSIEDCQKLADF    350

BSNT_01709___    351 MKKFQQENE    359
                     |||||||||
BPUM_0948___s    351 MKKFQQENE    359


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