Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01709 and BPUM_0948
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_01709___serC.1.24716.seq
# -bsequence dna-align/BPUM_0948___serC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01709___serC-BPUM_0948___serC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01709___serC-BPUM_0948___serC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01709___serC
# 2: BPUM_0948___serC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1117
# Identity: 787/1117 (70.5%)
# Similarity: 787/1117 (70.5%)
# Gaps: 74/1117 ( 6.6%)
# Score: 2646.0
#
#
#=======================================
BSNT_01709___ 1 ATGGAACGTACAACGAATTTTAACGCAGGTCCTGCAGCGCTGCCACTGGA 50
|||.|.||.||.|||||||||||.||.|||||.||.||.|||||.||.||
BPUM_0948___s 1 ATGAAGCGAACGACGAATTTTAATGCTGGTCCGGCGGCACTGCCGCTAGA 50
BSNT_01709___ 51 AGTTCTGCAAAAAGCACAGAAAGAATTTATTGATTTTAACGAATCCGGCA 100
|||.||..||||.||||||.|||||.||.||||||||||..||.|.||.|
BPUM_0948___s 51 AGTGCTTAAAAAGGCACAGGAAGAACTTGTTGATTTTAAACAAACTGGAA 100
BSNT_01709___ 101 TGTCTGTTATGGAGCTTTCCCACCGCAGCAAAGAGTATGAAGCGGTGCAC 150
|||||||.||||||||.||.||.|||||....||.|||||||..||.||
BPUM_0948___s 101 TGTCTGTAATGGAGCTGTCGCATCGCAGTGGTGAATATGAAGAAGTCCA- 149
BSNT_01709___ 151 CAAAAAGCGAAAAGC-CTCTTAATCGAACTGATGGGCATTCCGGAAGATT 199
|||.|||..||||.| .|.||..|.||||||||||.||||||.|||.|||
BPUM_0948___s 150 CAATAAGGCAAAATCATTGTTGGTTGAACTGATGGACATTCCTGAAAATT 199
BSNT_01709___ 200 ACGATATCTTGTTTCTTCAAGGCGGGGCAAGCCTTCAATTCTCAATGCTT 249
|.||..||.|.|||.|.||.|||||.||.|||||||||||..|.|||.||
BPUM_0948___s 200 ATGAAGTCCTCTTTTTACAGGGCGGAGCTAGCCTTCAATTTGCGATGATT 249
BSNT_01709___ 250 CCGATGAACTTTTTAACACCTGAA---AAAACCGCACATTTTGTGATGAC 296
||.||||||||.|| ||.|||| .||||.||.|||||..|....||
BPUM_0948___s 250 CCTATGAACTTCTT---ACATGAAGGCGAAACGGCTCATTTCATTCAAAC 296
BSNT_01709___ 297 AGGCGCTTGGTCTGAAAAAGCACTGGCAGAAACGAAATTGTTCGG-GAAC 345
||||||||||||.|||||||||.|..|||||.|.|||..|||.|| |||
BPUM_0948___s 297 AGGCGCTTGGTCAGAAAAAGCATTATCAGAAGCAAAAGGGTTTGGTGAA- 345
BSNT_01709___ 346 ACGTCTATCACCGCTACTAGTGAA-ACAGACAATTACAGCTATATTCCAG 394
||.|||.|....|||.|.|||||| || |||||.|||...||||||||||
BPUM_0948___s 346 ACATCTGTGTTTGCTTCAAGTGAAGAC-GACAACTACTCGTATATTCCAG 394
BSNT_01709___ 395 AGGTTGA--CCTTACGGATGTAAAAGACGGCGCATATTTACATATCACAT 442
|.||.|| ||| |.|.|.|||.|||.|||||.||||||||.|||||||
BPUM_0948___s 395 AAGTAGATGCCT--CCGCTTTAACAGATGGCGCTTATTTACACATCACAT 442
BSNT_01709___ 443 CCAACAATACAATTTTCGGCACTCAGTGGCAGGAGTTTCCGAATTC-TCC 491
|.|||||||||||.|||||||||||||||.|...||||||...|.| ||
BPUM_0948___s 443 CAAACAATACAATCTTCGGCACTCAGTGGAAAACGTTTCCTGGTACATC- 491
BSNT_01709___ 492 TATT-CCGCTCGTAGCCGACATGTCCAGCGATATTTTAAGCAGAAAAATC 540
||| ||||||.|.||.||.||||||||.||||||.|.||||.|||||||
BPUM_0948___s 492 -ATTACCGCTCATTGCGGATATGTCCAGTGATATTCTCAGCAAAAAAATC 540
BSNT_01709___ 541 GATGTGTCCAAATTTGATGTGATCTACGGAGGCGCCCAAAAGAACCTCGG 590
|||||.||..||||.|||.|.||.||.|..||.||.|||||.|||.|.||
BPUM_0948___s 541 GATGTTTCTCAATTCGATCTCATTTATGCTGGGGCACAAAAAAACTTAGG 590
BSNT_01709___ 591 CCCTTCCGGCGTGACTGTAGTCA--------------TTATGAAAAAAAG 626
.|||||.||..|.||..|.||.| ||||.|.||||||
BPUM_0948___s 591 GCCTTCTGGTATCACGATTGTGATCGCGCGCAAACGTTTATTAGAAAAAG 640
BSNT_01709___ 627 CTGGCTGAAAAATGAAAATGCGAACGTCCCAAAAATCCTGAAATATTCCA 676
.|||||| ||.|...||.|||||..|.||||||||.|
BPUM_0948___s 641 -----AGAAAAA---------GAGCACACCGAAAATATTAAAATATTCAA 676
BSNT_01709___ 677 CACATGTCAAAGCGGATTCACTCTACAACACTCCGCCGACATTTGCGATT 726
||||.|..|||||.|..||.||.||..||||.||.|||||.|||||||||
BPUM_0948___s 677 CACACGCAAAAGCTGGCTCTCTTTATCACACACCACCGACTTTTGCGATT 726
BSNT_01709___ 727 TATATGCTGAGCCTCGTTCTGGA--ATGGCTCAAGGAAAAC-----GGCG 769
|||||||||...||.||.||.|| |||.| |||| ||||
BPUM_0948___s 727 TATATGCTGTCTCTTGTCCTTGACCATGTC-------AAACAGGCTGGCG 769
BSNT_01709___ 770 GTGTGGAAGCTGTTGAACAGCGCAATGAACAAAAAGCGCAGG--TTCTCT 817
|.||.|||||.|..|||.|..|.|||||||||||| ||||| ||||||
BPUM_0948___s 770 GCGTAGAAGCAGCGGAAAAAAGAAATGAACAAAAA--GCAGGCATTCTCT 817
BSNT_01709___ 818 ACAGCTGTATTGATGAAAGCAACGGCTTCTATAAAGGTCATGCCAGAAAG 867
||..|...||||||.|||||..|||.||.||.|||||.||.||..|||..
BPUM_0948___s 818 ACGACACAATTGATCAAAGCGGCGGTTTTTACAAAGGACACGCACGAACT 867
BSNT_01709___ 868 GACAGCCGCTCACGCATGAATGTCACCTTCACGCTTCGGGATGACGAATT 917
||.|||||.||.|..|||||||||||.||.||.|||||.|||||.|.|.|
BPUM_0948___s 868 GATAGCCGGTCGCATATGAATGTCACATTTACCCTTCGTGATGATGCACT 917
BSNT_01709___ 918 AACGAAAACATTCGTCCAGAAAGCAAAAGATGCGAAGATGATCGGCCTTG 967
.||...|.|.||.||..||||||||||..|||...|.|||.|.||.||||
BPUM_0948___s 918 CACTGCATCCTTTGTAGAGAAAGCAAAGCATGAACAAATGGTTGGACTTG 967
BSNT_01709___ 968 GCGGACACCGTTCGGTGGGAGGCTGCCGCGCTTCTATTTATAACGCGGTC 1017
.|||.||.|||||.||.||.||.|||.|.||.||||||||.||.|||||.
BPUM_0948___s 968 CCGGTCATCGTTCTGTCGGTGGATGCAGAGCATCTATTTACAATGCGGTA 1017
BSNT_01709___ 1018 TCTCTCGAAGACTGTGAAAAATTAGC-TGCG---TTCATGAAGAAATTCC 1063
||..|.||||||||..||| ||| |||| ||.|||||.||.||||
BPUM_0948___s 1018 TCGATTGAAGACTGCCAAA----AGCTTGCGGACTTTATGAAAAAGTTCC 1063
BSNT_01709___ 1064 AGCAGGAAAATGAGTAA 1080
||||.||||||||||.|
BPUM_0948___s 1064 AGCAAGAAAATGAGTGA 1080
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