Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01708 and BPUM_0947

See DNA alignment / Visit BSNT_01708 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence pep-align/BSNT_01708___yhaG.1.24716.seq
#    -bsequence pep-align/BPUM_0947___yhaG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01708___yhaG-BPUM_0947___yhaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01708___yhaG-BPUM_0947___yhaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01708___yhaG
# 2: BPUM_0947___yhaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:     110/173 (63.6%)
# Similarity:   136/173 (78.6%)
# Gaps:           2/173 ( 1.2%)
# Score: 557.0
# 
#
#=======================================

BSNT_01708___      1 MKTKELVIMALFAAIGAALHSIIPPFLGGMKPDMMLIMMFMGILLFPRVQ     50
                     |||||||||:|.||:||.||:|.||...||||||||:|||:.|:|||:||
BPUM_0947___y      1 MKTKELVIMSLLAAMGAVLHTIFPPIFFGMKPDMMLVMMFLSIILFPKVQ     50

BSNT_01708___     51 NVLVIGIVTGIISALTTAFPAGQIPNIIDKPVSAFLFFSLFLLFRK-SRK     99
                     :|:||.:|||.||||||.||.|||||:|||||:||:|.:|||...| ..|
BPUM_0947___y     51 HVVVIALVTGAISALTTGFPGGQIPNMIDKPVTAFIFLALFLSCMKIKNK    100

BSNT_01708___    100 TGAAAVLTVIGTILSGIVFLSSALLIVGLPGGFAALFAAVVLPAAVLNTI    149
                     ....||||.||||:||::|||:||||.|||....||...|||||||:|||
BPUM_0947___y    101 VVLTAVLTAIGTIVSGVIFLSAALLITGLPAALPALLVGVVLPAAVINTI    150

BSNT_01708___    150 SMIIIYPIVQTILRRSSFMEAAK    172
                     :|:.::||.|:||||:..:|.| 
BPUM_0947___y    151 AMVFVFPIAQSILRRARMIEVA-    172


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.