Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01708 and BPUM_0947
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_01708___yhaG.1.24716.seq
# -bsequence dna-align/BPUM_0947___yhaG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01708___yhaG-BPUM_0947___yhaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01708___yhaG-BPUM_0947___yhaG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01708___yhaG
# 2: BPUM_0947___yhaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity: 364/536 (67.9%)
# Similarity: 364/536 (67.9%)
# Gaps: 34/536 ( 6.3%)
# Score: 1129.0
#
#
#=======================================
BSNT_01708___ 1 ATGAAAACAAAAGAGTTAGTCATTATGGCTCTGTTTGCCGCAATCGGCGC 50
||||||||||||||.||||||||||||.|..||.||||.|||||.||.||
BPUM_0947___y 1 ATGAAAACAAAAGAATTAGTCATTATGTCATTGCTTGCAGCAATGGGAGC 50
BSNT_01708___ 51 AGCGCTTCATTCCATTATTCCGCC---CTTTTTAGGCGGCATGAAACCAG 97
.|...|.|||.|.|||.|.||||| |||||| |||.||||||||.|
BPUM_0947___y 51 TGTTTTGCATACGATTTTCCCGCCCATCTTTTT---CGGAATGAAACCTG 97
BSNT_01708___ 98 ATATGATGCTGATCATGATGTTCATGGGCATTCTGCTGTTCCCGCGGGTG 147
|||||||||||.||||||||||..|..||||..|.||.|||||...|||.
BPUM_0947___y 98 ATATGATGCTGGTCATGATGTTTTTAAGCATCATCCTTTTCCCAAAGGTA 147
BSNT_01708___ 148 CAAAATGTACTCGTCATCGGGATCGTGACCGGAATCATTTCCGCGCTTAC 197
||..||||..|.||.||.|...||||.||.||...||||||.||..|.||
BPUM_0947___y 148 CAGCATGTCGTGGTGATTGCCCTCGTAACAGGCGCCATTTCTGCATTAAC 197
BSNT_01708___ 198 AACCGCGTTTCCAGCCGGACAGATCCCCAACATCATTGATAAACCCGTAT 247
|||.|..|||||||.||||||.||.||.||.||.|||||||||||.||..
BPUM_0947___y 198 AACAGGTTTTCCAGGCGGACAAATTCCAAATATGATTGATAAACCAGTGA 247
BSNT_01708___ 248 CAGCGTTTCTGTTCTTCTCCCTGTTTC---TCTTGTTCAGAAAGAGCCGA 294
||||.|||.|.|||||..|||| |||| ||||| ||..|||| .|
BPUM_0947___y 248 CAGCCTTTATCTTCTTAGCCCT-TTTCTTATCTTG--CATGAAGA---TA 291
BSNT_01708___ 295 AA-AACA----GGTGCAG-CCGCTGTGCTGACAGTGATCGGGACCATCTT 338
|| |||| .||||.| ||||||||.|.||.|.|||.||.||||||.|
BPUM_0947___y 292 AAGAACAAAGTAGTGCTGACCGCTGTGTTAACTGCGATTGGAACCATCGT 341
BSNT_01708___ 339 ATCAGGAATTGTGTTTCTATCGTCAGCTTTATTGATCGTCGGTTTACCGG 388
|||.||..|..|.||.|||||..|.||.|||.|||||...||..|.||.|
BPUM_0947___y 342 ATCCGGCGTGATTTTCCTATCTGCCGCATTACTGATCACTGGACTGCCAG 391
BSNT_01708___ 389 GCGGTTTCGCCGCA-TTGTTCGCGGCTGTTGTTCTGCCGGCCGCTGTGCT 437
..|..||..|.||| ||.||...||| ||.||.|||||.||.||.|||.|
BPUM_0947___y 392 CTGCATTACCTGCACTTCTTGTAGGC-GTCGTCCTGCCAGCAGCCGTGAT 440
BSNT_01708___ 438 GAATACAATCTCAATGATCATTATTTAT----CCGATTGTGCAAACCATT 483
.|||||.||..|.||| .|||||.| ||.||||..||..|||||
BPUM_0947___y 441 TAATACCATTGCTATG----GTATTTGTCTTCCCAATTGCTCAGTCCATT 486
BSNT_01708___ 484 TTAAGGCGTTCAAGCTTTATGGAAGCTGCTAAATAA 519
.|.||.|||.||||..|.||.||||.||||.||
BPUM_0947___y 487 CTCAGACGTGCAAGAATGATAGAAGTTGCTTAA--- 519
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