Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01702 and BPUM_0942

See DNA alignment / Visit BSNT_01702 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence pep-align/BSNT_01702.1.24716.seq
#    -bsequence pep-align/BPUM_0942.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01702-BPUM_0942.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01702-BPUM_0942.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01702
# 2: BPUM_0942
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 176
# Identity:      89/176 (50.6%)
# Similarity:   119/176 (67.6%)
# Gaps:           8/176 ( 4.5%)
# Score: 478.5
# 
#
#=======================================

BSNT_01702         1 MNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEY     50
                     |||||||||.||||..|::::|:...||.||:.||.|:|..|.|.||...
BPUM_0942          1 MNCWKTINLEKDYGYTRLLISAISLAILFFITAFLCFQLTHPETRLSSHN     50

BSNT_01702        51 VSLFGGLLVVILFAHKVIHVLPIICKKRKIEKKFYILRMRTWKRIPKTTM    100
                     ..||..||:|.|..|:|:|::|::    |.:||..:.:...|:|:||..|
BPUM_0942         51 APLFAMLLLVTLLVHRVVHLIPVM----KNKKKMTLFKRNCWQRVPKNIM     96

BSNT_01702       101 LISLVSPFLLITPVLFYAALAFPNHAHYFCMISGIHAGYCLPDFLLALKL    150
                     |.||:|||.:|:||.|...:|||.:||||.:|:.|||||||||||.|.||
BPUM_0942         97 LYSLLSPFCVISPVYFVLGVAFPMYAHYFIIIASIHAGYCLPDFLFAWKL    146

BSNT_01702       151 IKAPKTAFIDQEADGLDILVEK----    172
                     :||||:..|||..|..||||::    
BPUM_0942        147 LKAPKSCIIDQAQDEFDILVDQTSSS    172


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