Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01701 and BPUM_0941

See DNA alignment / Visit BSNT_01701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence pep-align/BSNT_01701.1.24716.seq
#    -bsequence pep-align/BPUM_0941.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01701-BPUM_0941.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01701-BPUM_0941.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01701
# 2: BPUM_0941
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 54
# Identity:      42/54 (77.8%)
# Similarity:    46/54 (85.2%)
# Gaps:           6/54 (11.1%)
# Score: 210.0
# 
#
#=======================================

BSNT_01701         1 MAAVFILYFINRLTNTLCLVREIPEERQDKVFRFINVSILILLISSFVEI     50
                           :|.|||||||||||||||||||||||||||||||||||||||||
BPUM_0941          1 ------MYSINRLTNTLCLVREIPEERQDKVFRFINVSILILLISSFVEI     44

BSNT_01701        51 SFTV     54
                     :.::
BPUM_0941         45 TISI     48


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