Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01701 and BPUM_0941
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_01701.1.24716.seq
# -bsequence dna-align/BPUM_0941.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01701-BPUM_0941.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01701-BPUM_0941.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01701
# 2: BPUM_0941
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity: 122/165 (73.9%)
# Similarity: 122/165 (73.9%)
# Gaps: 18/165 (10.9%)
# Score: 496.0
#
#
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BSNT_01701 1 GTGGCTGCCGTGTTTATTTTATATTTCATAAACAGGCTCACCAATACATT 50
||| ||||..|||||||||||.||.||||||||
BPUM_0941 1 ---------GTG---------TATTCAATAAACAGGCTTACTAATACATT 32
BSNT_01701 51 ATGCCTTGTCAGAGAGATTCCTGAAGAGCGGCAAGATAAGGTATTCCGAT 100
|||||||||||||||||||||||||||.||||||||||||||.||.||.|
BPUM_0941 33 ATGCCTTGTCAGAGAGATTCCTGAAGAACGGCAAGATAAGGTGTTTCGCT 82
BSNT_01701 101 TTATTAATGTATCTATATTAATTTTACTGATCTCTTCGTTTGTGGAGATC 150
||||.||||||||.|||.|.||.|||||||||||.||.|||||.||.||.
BPUM_0941 83 TTATCAATGTATCGATACTGATCTTACTGATCTCATCATTTGTTGAAATT 132
BSNT_01701 151 TCCTTTACAGTGTAA 165
.||.|..|..|.|||
BPUM_0941 133 ACCATATCTATTTAA 147
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