Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01693 and BPUM_0935

See DNA alignment / Visit BSNT_01693 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_01693___yhaN.1.24716.seq
#    -bsequence pep-align/BPUM_0935___yhaN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01693___yhaN-BPUM_0935___yhaN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01693___yhaN-BPUM_0935___yhaN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01693___yhaN
# 2: BPUM_0935___yhaN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 992
# Identity:     373/992 (37.6%)
# Similarity:   561/992 (56.6%)
# Gaps:          95/992 ( 9.6%)
# Score: 1700.0
# 
#
#=======================================

BSNT_01693___      1 MRIISLHIYQYGKFSNRTFHFSASPVQVIYGLNEAGKTTMMSFIESMLFG     50
                     |:|.||||..:|||||||||||....|::|||||:||||:.:||||||||
BPUM_0935___y      1 MKIRSLHIAHFGKFSNRTFHFSDDGFQLVYGLNESGKTTLKTFIESMLFG     50

BSNT_01693___     51 FPKTKKYEPKTGGVYGGVLEAEHPEYGVLKIERTKGTAEKLSVYTEKGEV    100
                     |||.|.|:.|.|..|||.|.....|.||:.||||........|:...|||
BPUM_0935___y     51 FPKNKMYKSKQGSFYGGSLTCHDDEIGVIHIERTSDRGGHAQVFLPNGEV    100

BSNT_01693___    101 KQGDVLKQLFQGTDRSLYKAIYSFDVFGLQEIHAFNRDKIGEFLLFSSLF    150
                     |....|:.|.:||||.||::||||||||||.:.|.|:|:|||||||||||
BPUM_0935___y    101 KDEAFLQALLKGTDRRLYQSIYSFDVFGLQNVQALNQDQIGEFLLFSSLF    150

BSNT_01693___    151 GAEAVSKLDSRLTKESERLYKPNGRNPQLNQELETLKQLAVKLKQAEAEE    200
                     |::|.:|:||||.|:.|:|:|||||.|:|||:|:.||:|..:||||...|
BPUM_0935___y    151 GSDAATKMDSRLLKQQEQLFKPNGRKPELNQQLDRLKELTGQLKQARLVE    200

BSNT_01693___    201 AGYHQLLGEKRMLEARLAAAETELKETAGHIRMIEGAIERKPLLNEKATL    250
                     ..|.:...|:..|...:...:.|:|:|..|::.:..:|:..|::.:|..|
BPUM_0935___y    201 GSYTEKKREQSELTETIEKLQNEMKQTEEHLQKLTESIQVYPMIEKKVEL    250

BSNT_01693___    251 EQVIAEFPEHAGQFPADGLHQLEKYESHLHPKSAQLEALRVKMAELDKQR    300
                     ::.:|.||:...:|.|:..|:|:|.|||||||:|||.||:.|   ||..:
BPUM_0935___y    251 KKELARFPDRVKRFRAETKHELDKLESHLHPKNAQLTALKQK---LDHLQ    297

BSNT_01693___    301 QKLIPDKELLAKETLIQELSAAFHMYQSCGEQLAAIQAQL-RQASAQTAA    349
                     ..|:..:.|..|:||::       |.:...|   |..|:| ::..|:..|
BPUM_0935___y    298 TSLVQVQPLYDKDTLME-------MNRVVDE---ASNAELVKKRIAECRA    337

BSNT_01693___    350 GLEQL-NKTDENE----------LLNMNTSYDYEWQLQQAVQQYVQARDR    388
                     ..:.| .|.||.|          |..::.|.::||:|::.|.||::..||
BPUM_0935___y    338 NRDSLKQKIDEAEVKLKWERPIKLEQIDDSLEFEWELKETVTQYIRLMDR    387

BSNT_01693___    389 KRQLDETFELARQELEDTEKAVRAASSAILEDSQRKDKEAALR-AYDETQ    437
                     |.||||.|:.||.||::.|..::..          |:::..|. |.|:..
BPUM_0935___y    388 KAQLDERFDHARHELDEAEAVLKGL----------KEQQVKLHGAEDDAN    427

BSNT_01693___    438 GQHQEQAKLREQLTFFERQQAKQKKTVIAVGMLFI-VLFSLLQQWIPAIS    486
                     ....::..:..|.:.|:        .:||..::|: |||.|.:.||..:.
BPUM_0935___y    428 NTRSKKKPIDSQASLFQ--------GLIAFDVVFLFVLFFLTEWWITLLF    469

BSNT_01693___    487 FGAALIVYWLVSGKSSSRNSRETRQ-----PMTDISPAEAEMLREALWED    531
                     .|.::.:::::. ..|.|||.:.|.     ....:..|.||.|       
BPUM_0935___y    470 AGFSVFLFFVIY-SFSQRNSNKQRNGEDALDSFQVQAASAETL-------    511

BSNT_01693___    532 DRNKQHLLTQRAALQQKEAAYERVIQQFEQWEAEMAPSFTQVERFMNELG    581
                                  ::|||..|||:|:|:|.||.|:.|...|||....:||
BPUM_0935___y    512 -------------MRQKELLYERIIRQYEDWELELEPVQQQVEEKKRQLG    548

BSNT_01693___    582 FKEDPSFLLDAYSLMKDVKKEVKKKHELTIEAGRLKKHRRTFEERVSMLL    631
                     ...:.|||::|:.::|.:|.......|...|..:|...:..:|.:||.|.
BPUM_0935___y    549 LSSELSFLVEAFHILKQLKMNTAAYDEFQREIEKLSDQQSIYERKVSALS    598

BSNT_01693___    632 PVNQSQDISISDALHTLRKNIEREKEIEKQKKEIETDIHYTKEQMLELEQ    681
                     .:.|.::.:|.:.:...::.::.|.:.||:::.:...|.:..:|:..||.
BPUM_0935___y    599 SILQKKEGTIQENISVFQEILKDETKREKERQTLHVSIQHAMQQLTTLEG    648

BSNT_01693___    682 EIQYFHAQIEQLFAAAAAKDRDAFFAIADISRQLKDTENKLHHVNAQL--    729
                     ||||:..|.::||....|:.::.:..::.:|::.::..::|..:|.:|  
BPUM_0935___y    649 EIQYYEKQTDELFRQVEAESKEDYQVLSHLSKEYRERLSELQQLNQELHR    698

BSNT_01693___    730 QGGYPEE----------LELADSNTLSELKDKQFVENERKERLTEEIERL    769
                     .|.:.||          ||...:.....|.|.|......::||.|     
BPUM_0935___y    699 SGCFDEEEWIVRKGLPLLEEECAKAKQHLHDVQLNAENTEKRLAE-----    743

BSNT_01693___    770 RSQIALLSVKQEQLEASGLVSDLKLQTEMQKDRVKETAKKWASIQMVKQV    819
                           |:|:..|:||||.||||..|...:::..|..|||||:||:|:.|
BPUM_0935___y    744 ------LAVEIRQIEASGTVSDLTHQLTAEQEHAKHLAKKWAAIQLVRTV    787

BSNT_01693___    820 IRNKLERHKKIELPRLLETAGEFFRPLTDGNYQTIYFSETDDSIMVMHRD    869
                     ||.||..||:..||.||.||..|.:|||:..|:.|.||..||.:||...|
BPUM_0935___y    788 IREKLNEHKETRLPALLHTASSFIQPLTNDRYEAILFSPEDDLLMVKRMD    837

BSNT_01693___    870 GTVYHAEELSQGTCEQLYTAIRFALAVTRQGGSKLPFQLDDSFVHFDQER    919
                     |.::..|||||.||||:|.|||||||::.|...:|||.:||||||||..|
BPUM_0935___y    838 GRIFRPEELSQATCEQIYLAIRFALALSHQQDCQLPFMMDDSFVHFDHVR    887

BSNT_01693___    920 LKRVLHVLYNLSEGGRQILYFTCHEHVKDAFHSSQIIHLVS-    960
                     |.|||.::..|:....|:.|||||||:|.|....|:..|.. 
BPUM_0935___y    888 LGRVLEMMNELTRFETQLFYFTCHEHMKQAAEDGQVTSLAVE    929


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01693 and BPUM_0935

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
