Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01687 and BPUM_0932

See DNA alignment / Visit BSNT_01687 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_01687___yhaR.1.24716.seq
#    -bsequence pep-align/BPUM_0932.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01687___yhaR-BPUM_0932.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01687___yhaR-BPUM_0932.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01687___yhaR
# 2: BPUM_0932
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity:     122/272 (44.9%)
# Similarity:   170/272 (62.5%)
# Gaps:          17/272 ( 6.2%)
# Score: 620.0
# 
#
#=======================================

BSNT_01687___      1 MYRRKKKESVYLEVLHMEFVQYACNGAVAEIILNRPDAHHALNEQLLSEL     50
                                     |.:::...||.:.||:.:||||:::.:..:.:|.
BPUM_0932          1 ----------------MTYIKCQLNGDIFEIVFDRPDAYNSFHVDMFAEF     34

BSNT_01687___     51 KEAVEMAAASEALIVLLRGSGKGFSAGGDIRMMTSEHDPDQFKRLMDTIE    100
                     |||.:.|..|.|.:|:::|:||||||||||.||..:...:.|.|:||.||
BPUM_0932         35 KEACDAAEESSAKVVVIKGAGKGFSAGGDIGMMLKQESEEDFHRVMDLIE     84

BSNT_01687___    101 AVTLNLYQMKKVTIAAIHGAAAGLGLSLALCADIVLAEKNAVLAMNFIGI    150
                     .:||:|..|||||||.:||:||||..|.||..|.:...::|.|||||.|:
BPUM_0932         85 GITLSLAGMKKVTIALVHGSAAGLAFSFALSCDYLFMHQDAKLAMNFNGV    134

BSNT_01687___    151 GLVPDGGGHYLLKKRIGEAKAKKLIWSGKKLSASEAADMGLLDGTFAGDP    200
                     ||:||||||:.|.||:.|..||:|||||:||.|.||..:.|.||.|..:.
BPUM_0932        135 GLIPDGGGHFFLTKRVSEQTAKQLIWSGQKLPAEEALKLRLADGVFQEEV    184

BSNT_01687___    201 AEGARPIIETLLASPLLAMIETKAIFQSLQIEELKKVLSLERSAQERMRR    250
                     ....:..::..:..||.|.||||.|:......:|..||..||:||.|:|:
BPUM_0932        185 DAYQKECVKPFMNMPLQAFIETKRIYFQQSESQLLAVLQKERAAQARLRQ    234

BSNT_01687___    251 TKDHQEGIRAFLEKREPKFQA-    271
                     :.||:|||:||||||.|.||. 
BPUM_0932        235 SHDHKEGIQAFLEKRRPVFQNV    256


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