Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01681 and BPUM_0929

See DNA alignment / Visit BSNT_01681 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_01681___yhaX.1.24716.seq
#    -bsequence pep-align/BPUM_0929___yhaX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01681___yhaX-BPUM_0929___yhaX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01681___yhaX-BPUM_0929___yhaX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01681___yhaX
# 2: BPUM_0929___yhaX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     206/289 (71.3%)
# Similarity:   254/289 (87.9%)
# Gaps:           2/289 ( 0.7%)
# Score: 1101.0
# 
#
#=======================================

BSNT_01681___      1 MSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSA     50
                     |||:||||||||.|||||||||.|||:|:|||||||:|||||||||||||
BPUM_0929___y      1 MSKKLLALNIDGTLLRSNGKIHSATKEAVEYVKKKGVYVTLVTNRHFRSA     50

BSNT_01681___     51 QKIAKSLKL-DAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESY     99
                     |||||:||: .:.|:|||||:||.|:|.|...|:::::.|||:||:|||:
BPUM_0929___y     51 QKIAKALKIPTSTLVTHSGAFIANKLDEPLHVKKLTEEKTFNLVQILESF    100

BSNT_01681___    100 QCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLM    149
                     .||:||||||:||||:||..|.|:||.||||||||||||||||||||:||
BPUM_0929___y    101 DCNVRLLHEKFSIGNRKKTQSQLMGKTLIHPSDPIFYPVQFVESLSDMLM    150

BSNT_01681___    150 DEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVS    199
                     |||||.||||||:..::|.:|.:||.:|||:||:|:::|||:|||.||||
BPUM_0929___y    151 DEPVSTPVIEVYSTSELQPEIHQTIQQAFPSVDLIQISDEKMNIVCKGVS    200

BSNT_01681___    200 KEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKR    249
                     |||||:|:.|.|||:::|.|.|||..||:||:||||||||||||...:||
BPUM_0929___y    201 KEAGLSLLTSALGLTLEDTVVIGHGTDDIPMLELAGLGVAMGNATHTVKR    250

BSNT_01681___    250 KADWVTRSNDEQGVAYMMKEYFRMQQRKGFLDKFHMKRV    288
                     ||||||||:||||||||:|||||||||:|||.:|.:|| 
BPUM_0929___y    251 KADWVTRSHDEQGVAYMIKEYFRMQQREGFLHQFDIKR-    288


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