Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01674 and BPUM_0925
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence pep-align/BSNT_01674___yheD.1.24716.seq
# -bsequence pep-align/BPUM_0925___yheD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01674___yheD-BPUM_0925___yheD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01674___yheD-BPUM_0925___yheD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01674___yheD
# 2: BPUM_0925___yheD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 461
# Identity: 203/461 (44.0%)
# Similarity: 304/461 (65.9%)
# Gaps: 17/461 ( 3.7%)
# Score: 1043.0
#
#
#=======================================
BSNT_01674___ 1 MNPKRFLIGIDKTSENTLFLPSSLKRDGLLHA-AFGTKVV-RCHVAYRRH 48
||..|.:|.....||.|:.||...|:..:::: |.|:::| ...|:|.:|
BPUM_0925___y 1 MNKNRCIIATHPASEKTIHLPVHFKQQEVIYSLALGSRLVDDFTVSYHQH 50
BSNT_01674___ 49 LEQTVLLSENLFHELLLPHRSRADILIHDHTVHIGPLVGIFTAGFTVSLE 98
...:||||:|:.:||:|::||||::..|||:.||||:|||||||..|.:
BPUM_0925___y 51 -PNKILLSEDLYKDLLIPYQSRADVIAIDHTLFIGPLLGIFTAGFEKSTQ 99
BSNT_01674___ 99 RPFKDRSLFFSKLVTLHEQAGGYCFVFGAHQINWEEGTIEGLLYRENGWE 148
|...||.||..|:...:|..|:.::||.|.|:|::|.:|||||::..|.
BPUM_0925___y 100 -PLGTRSDFFINLLHSFKQHVGFAYLFGTHSIDWDKGIVEGLLYQQKTWI 148
BSNT_01674___ 149 KKIVPLPNVVYDRLPNRKIEDSLLLQHTKKRLIDEYQIPWFNKTFFNKWN 198
||.:|||:|:||||||||...|..:|.||::|..:|.|||||.:|||||:
BPUM_0925___y 149 KKKMPLPSVIYDRLPNRKAAQSAFVQETKRKLTQDYDIPWFNPSFFNKWD 198
BSNT_01674___ 199 VHQLLEKDPRTAPFLPRS-ELTP--SVELIDELCGAYKKVYIKPANGALG 245
:|:.|..|.:|.||||.| :|.| ::..|:.|...::.:|:||:||:.|
BPUM_0925___y 199 IHEQLLTDEKTCPFLPHSIQLDPVDALNKIETLLHLHEVIYLKPSNGSHG 248
BSNT_01674___ 246 TGIYQLKRTDGGLTV-KHTNDAKTFTSIDYSDAASFLAEFQKQQNPSDFL 294
.|||||.:|..|:|| .:...|..|.|::: |:...:|.....||:
BPUM_0925___y 249 DGIYQLNKTTYGITVSSNQGRAVPFDSVEH-----FVTNLRKDHAIQDFM 293
BSNT_01674___ 295 IQQGVDLIEFQGKPADFRVHTNKNRKGKWTVTAIAVKISGKNSITTHLSN 344
.|||:.|::...:|.|||||||||:.|.|||||...||||.:::|||.|.
BPUM_0925___y 294 AQQGIALLQIDNQPMDFRVHTNKNKYGHWTVTAAVAKISGHHTVTTHHSY 343
BSNT_01674___ 345 GGTVKTLAEVYDDPAERVEVIKKLSAAALTASHVLHDHIEGFIGEIGFDF 394
|||||||.:|:.:...|::::::|...|:|.|.|:.:.:.|.|||||||.
BPUM_0925___y 344 GGTVKTLYDVFPEKKTRLKMLEQLFYTAITLSQVIDEKVSGHIGEIGFDL 393
BSNT_01674___ 395 GIDQNGKVWMFEANSRPGRSIFSHPNLHHVDSLTKRRSFEYASYLSEKAI 444
||||.|.:|||||||||||.:|.|.:|.:.:.|..:...:||:|||:..:
BPUM_0925___y 394 GIDQTGAIWMFEANSRPGRDVFQHVSLRNSERLIGKNLMDYAAYLSQTDL 443
BSNT_01674___ 445 ISPEALWPS-- 453
.:.: :.:
BPUM_0925___y 444 TTSD--YTNVY 452
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