Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05943 and BPUM_0922
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:30
# Commandline: needle
# -asequence pep-align/BSNT_05943___msmX.1.24716.seq
# -bsequence pep-align/BPUM_0922___msmX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05943___msmX-BPUM_0922___msmX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05943___msmX-BPUM_0922___msmX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05943___msmX
# 2: BPUM_0922___msmX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity: 278/368 (75.5%)
# Similarity: 316/368 (85.9%)
# Gaps: 3/368 ( 0.8%)
# Score: 1469.0
#
#
#=======================================
BSNT_05943___ 1 MAELRMEHIYKFYDQKEPAVDDFNLHIADKEFIVFVGPSGCGKSTTLRMV 50
|||:.:..|||.||.|..|||:|||||.|||||||||||||||||||||:
BPUM_0922___m 1 MAEMMLNQIYKVYDNKVTAVDNFNLHIEDKEFIVFVGPSGCGKSTTLRMI 50
BSNT_05943___ 51 AGLEEISKGDFYIEGKRVNDVAPKDRDIAMVFQNYALYPHMTVYDNIAFG 100
|||||||:|||.::|||:|||||||||||||||||||||||.||||:|||
BPUM_0922___m 51 AGLEEISQGDFLLDGKRMNDVAPKDRDIAMVFQNYALYPHMNVYDNMAFG 100
BSNT_05943___ 101 LKLRKMPKPEIKKRVEEAAKILGLEEYLHRKPKALSGGQRQRVALGRAIV 150
|||||.||.||.:||..||||||||:||.|||||||||||||||||||||
BPUM_0922___m 101 LKLRKFPKSEIDERVRNAAKILGLEQYLDRKPKALSGGQRQRVALGRAIV 150
BSNT_05943___ 151 RDAKVFLMDEPLSNLDAKLRVQMRAEIIKLHQRLQTTTIYVTHDQTEALT 200
|||||||:|||||||||||||||||||.|||||||||.||||||||||:|
BPUM_0922___m 151 RDAKVFLLDEPLSNLDAKLRVQMRAEISKLHQRLQTTFIYVTHDQTEAMT 200
BSNT_05943___ 201 MATRIVVMKDGKIQQIGTPKDVYEFPENVFVGGFIGSPAMNFFKGKLTDG 250
||||:||||||.|||:|.||||||.||||||||||||||||||.|||:||
BPUM_0922___m 201 MATRLVVMKDGFIQQVGAPKDVYENPENVFVGGFIGSPAMNFFTGKLSDG 250
BSNT_05943___ 251 LIKIGSAALTVPEGKMKVLREKGYIGKEVIFGIRPEDIHDELIVVESYKN 300
.|.:|...:.||||||||||.:||||||:|.||||||.|||.:.:|:.:.
BPUM_0922___m 251 AIAVGKTHIRVPEGKMKVLRSQGYIGKEIILGIRPEDFHDEPVFIEASEG 300
BSNT_05943___ 301 SSIKAKINVAELLGSEIMIYSQIDNQDFIARIDARLDIQSGDELTVAFDM 350
:.|.|.:.||||:|:|.|:||.:|.|.||||:|:|.|:|:|..:.:|.||
BPUM_0922___m 301 TKINASVEVAELMGAETMLYSSLDGQSFIARVDSRTDVQAGQSIPLAIDM 350
BSNT_05943___ 351 NKGHFFDSETEVRIR--- 365
||.|||||:||:|||
BPUM_0922___m 351 NKAHFFDSDTELRIRSAE 368
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