Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01654 and BPUM_0914

See DNA alignment / Visit BSNT_01654 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_01654___yhdZ.1.24716.seq
#    -bsequence pep-align/BPUM_0914___yhdZ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01654___yhdZ-BPUM_0914___yhdZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01654___yhdZ-BPUM_0914___yhdZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01654___yhdZ
# 2: BPUM_0914___yhdZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     163/252 (64.7%)
# Similarity:   193/252 (76.6%)
# Gaps:           9/252 ( 3.6%)
# Score: 871.0
# 
#
#=======================================

BSNT_01654___      1 -----METFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRM     45
                          :...|..|.::..|:||:|||||||||||||||.||:||||.|||
BPUM_0914___y      1 MDQTKVTVLKEKLTQSSHIMVLSGAGMSTESGIPDFRSTGGLWTEDTSRM     50

BSNT_01654___     46 EAMSLDYFLSHPRLFWPKFKELFQMKMSGSFEPNEGHLFLAELEKQGKQV     95
                     ||||..||||:|..|||||||||||||||::|||.||.|||.||||||.|
BPUM_0914___y     51 EAMSRSYFLSNPHQFWPKFKELFQMKMSGAYEPNSGHTFLANLEKQGKHV    100

BSNT_01654___     96 NIFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGARYDLPHLLEREVPE    145
                     :|||||||||||||||:||||||||||||.||:|.|.|:||:||:.|||.
BPUM_0914___y    101 DIFTQNIDGLHKKAGSQHVYELHGSIQTATCPSCHATYELPYLLQEEVPV    150

BSNT_01654___    146 CTAAGNNGDICGTVLKTDVVLFGDAVMHFDTLYEKLDQADLLLVIGTSLE    195
                     |.....:|..||.|||||||||||.|.|||.:.:.|.|||||||:|||||
BPUM_0914___y    151 CLKVSADGRTCGQVLKTDVVLFGDRVKHFDQVEKSLQQADLLLVMGTSLE    200

BSNT_01654___    196 VAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGI    245
                     |||||::||||:..|.:.||::||..|..|.|||:|.|::||:..:.|  
BPUM_0914___y    201 VAPARYIPEDAAQNPSIFKVMMNLSETEYDQLFDLVFHERIGDLVKDL--    248

BSNT_01654___    246 KK    247
                       
BPUM_0914___y    248 --    248


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