Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01654 and BPUM_0914
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence pep-align/BSNT_01654___yhdZ.1.24716.seq
# -bsequence pep-align/BPUM_0914___yhdZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01654___yhdZ-BPUM_0914___yhdZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01654___yhdZ-BPUM_0914___yhdZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01654___yhdZ
# 2: BPUM_0914___yhdZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity: 163/252 (64.7%)
# Similarity: 193/252 (76.6%)
# Gaps: 9/252 ( 3.6%)
# Score: 871.0
#
#
#=======================================
BSNT_01654___ 1 -----METFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRM 45
:...|..|.::..|:||:|||||||||||||||.||:||||.|||
BPUM_0914___y 1 MDQTKVTVLKEKLTQSSHIMVLSGAGMSTESGIPDFRSTGGLWTEDTSRM 50
BSNT_01654___ 46 EAMSLDYFLSHPRLFWPKFKELFQMKMSGSFEPNEGHLFLAELEKQGKQV 95
||||..||||:|..|||||||||||||||::|||.||.|||.||||||.|
BPUM_0914___y 51 EAMSRSYFLSNPHQFWPKFKELFQMKMSGAYEPNSGHTFLANLEKQGKHV 100
BSNT_01654___ 96 NIFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGARYDLPHLLEREVPE 145
:|||||||||||||||:||||||||||||.||:|.|.|:||:||:.|||.
BPUM_0914___y 101 DIFTQNIDGLHKKAGSQHVYELHGSIQTATCPSCHATYELPYLLQEEVPV 150
BSNT_01654___ 146 CTAAGNNGDICGTVLKTDVVLFGDAVMHFDTLYEKLDQADLLLVIGTSLE 195
|.....:|..||.|||||||||||.|.|||.:.:.|.|||||||:|||||
BPUM_0914___y 151 CLKVSADGRTCGQVLKTDVVLFGDRVKHFDQVEKSLQQADLLLVMGTSLE 200
BSNT_01654___ 196 VAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGI 245
|||||::||||:..|.:.||::||..|..|.|||:|.|::||:..:.|
BPUM_0914___y 201 VAPARYIPEDAAQNPSIFKVMMNLSETEYDQLFDLVFHERIGDLVKDL-- 248
BSNT_01654___ 246 KK 247
BPUM_0914___y 248 -- 248
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