Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01653 and BPUM_0913
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence pep-align/BSNT_01653___yhdY.1.24716.seq
# -bsequence pep-align/BPUM_0913___yhdY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01653___yhdY-BPUM_0913___yhdY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01653___yhdY-BPUM_0913___yhdY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01653___yhdY
# 2: BPUM_0913___yhdY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 246/373 (66.0%)
# Similarity: 297/373 (79.6%)
# Gaps: 13/373 ( 3.5%)
# Score: 1297.0
#
#
#=======================================
BSNT_01653___ 1 --MPDYLQQYFTLDNIIQIGISLAILLVFLILRKLFTRYFFNLLFNLTNR 48
...::..|||:|..|||||||.|||:||:|||:||:|.|:|||.||||
BPUM_0913___y 1 MFTQKWMDTYFTVDVAIQIGISLCILLLFLLLRKVFTKYLFHLLFRLTNR 50
BSNT_01653___ 49 PKTEIFKQVVLAFDKPARWFFVALGLFLAIRYSPFLDEQIPVISKIYRSL 98
.|||:..|:|:||:||||.|||||||:.|:|.:|:.:..:.||.|:|||.
BPUM_0913___y 51 SKTEVINQIVVAFEKPARLFFVALGLYFALRQAPYFEHHMDVIIKLYRSS 100
BSNT_01653___ 99 IVALLCWGLCNLTATSSFIFHKVNQRFELDMDDILAPFLSKLLRFVIIAL 148
|:.:|.||||||||.|||:|.|||.:|||:|||||||||||:.||:||||
BPUM_0913___y 101 IILMLTWGLCNLTAASSFLFQKVNSKFELEMDDILAPFLSKVFRFIIIAL 150
BSNT_01653___ 149 SVSVIAQEFNYDVNGFVAGLGLGGLAFALAAKDTISNFFGGIIIITEKPF 198
|:|||||||||||||.|||||||||||||||:||::||||||:|||||||
BPUM_0913___y 151 SISVIAQEFNYDVNGLVAGLGLGGLAFALAAQDTVANFFGGIVIITEKPF 200
BSNT_01653___ 199 TIGDWVETSTVTGSVEDITFRSTRFRTAQGALVTVPNSTLSMEAITNWTR 248
|:||:|||.:|.|:|||||||||:|||...|:|||||||||.|.||||||
BPUM_0913___y 201 TMGDFVETPSVLGTVEDITFRSTKFRTPAEAVVTVPNSTLSKEPITNWTR 250
BSNT_01653___ 249 MTKRQITFSIHVSYATPIENLERSIHSLRTMLLEHEGVDNETIMVNFDTF 298
|.|||||||:.|||.||.|||:..|..|:.||.||:||..||||||.|..
BPUM_0913___y 251 MNKRQITFSVRVSYNTPKENLDHCIKRLKQMLDEHDGVHKETIMVNLDVL 300
BSNT_01653___ 299 ADSYYNLFFNFYTKTTVWAENLNIREDINYKIIEILGAEGVQFAYPGQMV 348
||||.||||||||.||||||||||::||||:|::|...|||:||:|||.:
BPUM_0913___y 301 ADSYLNLFFNFYTNTTVWAENLNIKQDINYRIMDIFHEEGVEFAFPGQTI 350
BSNT_01653___ 349 VVKQKHESDPFQVNLNKEEKERA 371
.:|||.|....:
BPUM_0913___y 351 YMKQKGEKQLSE----------- 362
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